SMTL ID : 6qhl.1

14-3-3 sigma with RelA/p65 binding site pS45

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

hetero-2-2-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: F.203, M.207, L.210, Y.218, T.222, M.225, Q.226 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.218, A:T.222 GOL.2: 6 residues within 4Å: Chain A: E.22, R.23, Y.24, E.25, D.26, V.56 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.23, A:Y.24, A:E.25, A:E.25 Water bridges: A:E.22, A:E.25, A:D.26 GOL.3: 7 residues within 4Å: Chain C: F.203, M.207, L.210, Y.218, T.222, M.225, Q.226 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Y.218, C:T.222 GOL.4: 6 residues within 4Å: Chain C: E.22, R.23, Y.24, E.25, D.26, V.56 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:R.23, C:Y.24, C:E.25, C:E.25, C:E.25 Water bridges: C:E.22, C:E.25, C:D.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wolter, M. et al., Selectivity via Cooperativity: Preferential Stabilization of the p65/14-3-3 Interaction with Semisynthetic Natural Products. J.Am.Chem.Soc. (2020)

Release Date

2020-05-13

Peptides

14-3-3 protein sigma: AC
Transcription factor p65: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

14-3-3 protein sigma

Transcription factor p65

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