SMTL ID : 6xhe.2 (1 other biounit)

Structure of beta-prolinyl 5'-O-adenosine phosphoramidate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

1 x V2J: 5'-O-[(S)-[(3S)-3-carboxypyrrolidin-1-yl](hydroxy)phosphoryl]adenosine(Non-covalent)

V2J.1: 9 residues within 4Å: Chain A: K.7, C.65, N.67, Q.69, N.71, A.109, E.111, V.118, H.119 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.7, A:N.67, A:N.71, A:N.71, A:H.119 Water bridges: A:Q.11 pi-Stacking: A:H.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jovanovic, D. et al., The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid. Angew.Chem.Int.Ed.Engl. (2020)

Release Date

2021-03-17

Peptides

Ribonuclease pancreatic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ribonuclease pancreatic

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