SMTL ID : 8fhm.2 (1 other biounit)

RNase A-Uridine 5'-Hexaphosphate (RNaseA.p6U)

Coordinates

PDB Format

Method

SOLUTION SCATTERING 1.79 Å

Oligo State

monomer

Ligands

2 x U6F: 5'-O-[(S)-hydroxy{[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]oxy}phosphoryl]oxy}phosphoryl]uridine(Non-functional Binders)(Non-covalent)

U6F.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) U6F.2: 14 residues within 4Å: Chain A: K.7, Q.11, H.12, R.39, K.41, V.43, N.44, T.45, K.66, H.119, F.120, D.121, A.122, S.123 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:Q.11, A:H.12, A:R.39, A:K.41, A:T.45, A:T.45, A:F.120 Water bridges: A:K.7, A:Q.11, A:V.118, A:V.118, A:H.119, A:H.119, A:H.119, A:S.123, A:S.123, A:S.123 Salt bridges: A:K.7, A:K.7, A:K.7, A:K.41, A:H.119, A:H.119, A:H.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, G. et al., Experimental and Computational Studies for the Effect of Lengthening the Phosphate Chain of Nucleotide on the RNase A inhibitors. To Be Published

Release Date

2023-12-20

Peptides

Ribonuclease pancreatic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ribonuclease pancreatic

Related Entries With Identical Sequence