SMTL ID : 3dxh.2 (1 other biounit)

Ribonuclease A uridine 5' diphosphate complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 7 residues within 4Å: Chain A: H.12, K.41, V.43, N.44, T.45, H.119, F.120 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:K.41, A:T.45, A:T.45, A:T.45, A:F.120, A:F.120 Water bridges: A:Q.11, A:Q.11, A:Q.11, A:N.44, A:H.119, A:S.123, A:S.123, A:S.123 Salt bridges: A:H.119, A:H.119 UDP.2: 3 residues within 4Å: Chain A: E.2, R.10, N.34 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.34, A:N.34 Water bridges: A:E.2, A:E.2, A:R.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsirkone, V.G. et al., Inhibitor design to Ribonuclease A: The binding of two 5'phosphate uridine analogues. Acta Crystallogr.,Sect.F (2009)

Release Date

2009-06-16

Peptides

Ribonuclease pancreatic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ribonuclease pancreatic

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