SMTL ID : 7qpy.2 (1 other biounit)

X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (3)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

2 x F5I: cis-bis(mi2-acetato-O, O')-tetraaquo-dirhodium(II)(Non-covalent)

F5I.1: 8 residues within 4Å: Chain A: A.4, K.7, F.8, Q.11, H.12, V.118, H.119, F.120 16 PLIP interactions: 13 interactions with chain A, 2 Ligand-Ligand interactions, 1 Ligand-Water interactions Hydrogen bonds: A:H.119 Water bridges: A:K.7, A:K.7, A:K.7, A:H.12, A:H.12, A:H.12, A:F.120, A:F.120 Salt bridges: A:K.7, A:H.119, A:H.119 Metal complexes: A:H.119, F5I.1, F5I.1, H2O.2 F5I.2: 2 residues within 4Å: Chain A: T.78, H.105 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.105 Water bridges: A:Q.74, A:H.105, A:H.105 Metal complexes: A:H.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Loreto, D. et al., Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins. Dalton Trans (2022)

Release Date

2022-03-16

Peptides

Ribonuclease pancreatic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ribonuclease pancreatic

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