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SMTL ID : 9fps.1

Crystal structure of carbonic anhydrase II with methyl 4-methylsulfanyl-3-sulfamoyl-benzoate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: 01.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

2 x 01: methyl 4-methylsulfanyl-3-sulfamoyl-benzoate

01.2:	11 residues within 4Å: Chain A: W.5, N.62, H.64, N.67, Q.92, F.130, L.197, T.199, P.200, P.201 Ligands: 01.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
01.3:	16 residues within 4Å: Chain A: Y.7, N.62, H.64, A.65, Q.92, H.94, H.96, H.119, V.121, F.130, L.197, T.198, T.199, N.243 Ligands: ZN.1, 01.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:T.199 Hydrogen bonds: A:N.62, A:E.106, A:T.198, A:T.199 Salt bridges: A:H.94, A:H.96 pi-Stacking: A:H.94

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4:

5 residues within 4Å:

Chain A: Y.7, P.13, D.242, W.244, P.246

3 PLIP interactions:

3 interactions with chain A

Salt bridges: A:D.242
pi-Cation interactions: A:W.244, A:W.244

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Smirnov, A. et al., Crystal structure of carbonic anhydrase II with methyl 4-methylsulfanyl-3-sulfamoyl-benzoate. To Be Published

Release Date

2025-06-25

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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