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SMTL ID : 3mmf.1

Crystal structure of human carbonic anhydrase II in complex with a 1,3,5-triazine-substituted benzenesulfonamide inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

7 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: D9H.2, GOL.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x D9H: 4-({4-chloro-6-[(2-hydroxyethyl)amino]-1,3,5-triazin-2-yl}amino)benzenesulfonamide(Non-covalent)

D9H.2:

17 residues within 4Å:

Chain A: I.91, Q.92, H.94, H.96, E.106, H.119, V.121, F.130, V.142, L.197, T.198, T.199, P.200, P.201, W.208
Ligands: ZN.1, GOL.3

10 PLIP interactions:

10 interactions with chain A

Hydrophobic interactions: A:V.121, A:L.197
Hydrogen bonds: A:Q.92, A:T.198, A:T.198
Water bridges: A:N.67, A:N.67, A:T.199, A:T.199
pi-Stacking: A:F.130

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3:

12 residues within 4Å:

Chain A: W.5, Y.7, N.62, H.64, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: ZN.1, D9H.2

5 PLIP interactions:

5 interactions with chain A

Hydrogen bonds: A:N.62, A:N.62, A:N.67, A:Q.92
Water bridges: A:H.64

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Carta, F. et al., Sulfonamides incorporating 1,3,5-triazine moieties selectively and potently inhibit carbonic anhydrase transmembrane isoforms IX, XII and XIV over cytosolic isoforms I and II: Solution and X-ray crystallographic studies. Bioorg.Med.Chem. (2011)

Release Date

2011-04-20

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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