A0A4P8PLM4 (A0A4P8PLM4_CHLRE) Chlamydomonas reinhardtii (Chlamydomonas smithii)
Cas9c UniProtKBInterProInteractive Modelling
1368 aa; Sequence (Fasta) ;
2 identical sequences: Streptococcus pyogenes serotype M1: Q99ZW2; Staphylococcus aureus: A0A386IRL6
It is possible new templates exist for this target since these models were created.
Available Structures
77 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Crystal structure of SpyCas9-sgRNA-AcrIIA4 ternary complex |
Heteromer A0A0E0UT28; Q99ZW2; | 2×PEG; 2×PG4; 1×EDO; 1×MG; | ||||
| Assess | ||||||
| Crystal structure of AcrIIA2-SpyCas9-sgRNA ternary complex |
Heteromer Q99ZW2; | |||||
| Assess | ||||||
| Structure of nuclease in complex with associated protein |
Heteromer A0A247D711; Q99ZW2; | |||||
| Assess | ||||||
| cryo-EM structure of the Cas9-sgRNA-AcrIIA4 anti-CRISPR complex |
Heteromer A0A2D0TCG7; Q99ZW2; | |||||
| Assess | ||||||
| Structure of the SpCas9 DNA adenine base editor - ABE8e |
Heteromer P68398; Q99ZW2; | 3×MG; 2×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of spyCas9-sgRNA-DNA dimer | homo-2-mer | |||||
| Assess | ||||||
| Cryo-EM structure of SpCas9-sgRNA-DNA ternary complex | monomer | 3×MG; | ||||
| Assess | ||||||
| Crystal structure of SpCas9 bound to a 10 nucleotide complementary DNA substrate | monomer | 10×K; | ||||
| Assess | ||||||
| SpCas9 bound to 10-nucleotide complementary DNA substrate | monomer | |||||
| Assess | ||||||
| SpCas9 bound to TRAC off-target1 DNA substrate | monomer | 2×MG; 17×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target1 DNA substrate | monomer | 2×MG; 10×K; | ||||
| Assess | ||||||
| Nuclease-inactive Streptococcus pyogenes Cas9 (D10A/H840A, dCas9) in complex with single-guide RNA … | monomer | |||||
| Assess | ||||||
| Target-bound SpCas9 complex with AAVS1 chimeric RNA-DNA guide | monomer | 2×MG; 14×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF on-target DNA substrate | monomer | 2×MG; 10×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target2 DNA substrate | monomer | 2×MG; 13×K; | ||||
| Assess | ||||||
| Target-bound SpCas9 complex with AAVS1 all-RNA guide | monomer | 2×MG; 11×K; | ||||
| Assess | ||||||
| SpCas9 bound to TRAC off-target2 DNA substrate | monomer | 2×MG; 14×K; | ||||
| Assess | ||||||
| SpCas9 bound to AAVS1 off-target4 DNA substrate | monomer | 2×MG; 13×K; 1×EDO; | ||||
| Assess | ||||||
| Crystal structure of xCas9 in complex with sgRNA and DNA (CGG PAM) | monomer | 9×PO4; | ||||
| Assess | ||||||
| SpCas9 bound to PTPRC off-target1 DNA substrate | monomer | 2×MG; 10×K; | ||||
| Assess | ||||||
| Crystal structure of xCas9 in complex with sgRNA and DNA (TGG PAM) | monomer | 5×PO4; | ||||
| Assess | ||||||
| SpCas9 bound to AAVS1 off-target1 DNA substrate | monomer | 2×MG; 12×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target4 DNA substrate | monomer | 2×MG; 10×K; | ||||
| Assess | ||||||
| Crystal structure of xCas9 in complex with sgRNA and DNA (TGA PAM) | monomer | |||||
| Assess | ||||||
| SpCas9 bound to 18-nucleotide complementary DNA substrate in the catalytic state | monomer | 4×MG; | ||||
| Assess | ||||||
| SpCas9 bound to 12-nucleotide complementary DNA substrate | monomer | |||||
| Assess | ||||||
| SpCas9 bound to 6 nucleotide complementary DNA substrate | monomer | |||||
| Assess | ||||||
| SpCas9 bound to 14-nucleotide complementary DNA substrate | monomer | |||||
| Assess | ||||||
| SpCas9 bound to 8-nucleotide complementary DNA substrate | monomer | |||||
| Assess | ||||||
| Crystal structure of the Streptococcus pyogenes Cas9 VRER variant in complex with sgRNA and target … | monomer | 10×K; 3×MG; 5×EDO; 1×ACT; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target3 DNA substrate | monomer | 2×MG; 10×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target7 DNA substrate | monomer | 2×MG; 11×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target5 DNA substrate | monomer | 2×MG; 9×K; | ||||
| Assess | ||||||
| SpCas9 bound to CD34 off-target9 DNA substrate | monomer | 2×MG; 8×K; | ||||
| Assess | ||||||
| Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA | monomer | |||||
| Assess | ||||||
| SpCas9 bound to AAVS1 off-target3 DNA substrate | monomer | 2×MG; 10×K; 4×EDO; | ||||
| Assess | ||||||
| Target-bound SpCas9 complex with TRAC chimeric RNA-DNA guide | monomer | 2×MG; 14×K; | ||||
| Assess | ||||||
| Crystal structure of SpCas9-NG | monomer | 10×K; 3×MG; 3×EDO; | ||||
| Assess | ||||||
| SpCas9 bound to AAVS1 off-target5 DNA substrate | monomer | 2×MG; 13×K; 5×EDO; | ||||
| Assess | ||||||
| Target-bound SpCas9 complex with TRAC full RNA guide | monomer | 2×MG; 12×K; | ||||
| Assess | ||||||
| Crystal structure of catalytically-active Streptococcus pyogenes Cas9 in complex with single-guide … | monomer | |||||
| Assess | ||||||
| Crystal structure of xCas9 P411T | monomer | |||||
| Assess | ||||||
| SpCas9 bound to AAVS1 off-target2 DNA substrate | monomer | 2×MG; 13×K; | ||||
| Assess | ||||||
| SpCas9 bound to FANCF off-target6 DNA substrate | monomer | 2×MG; 11×K; 1×EDO; | ||||
| Assess | ||||||
| Conformational states of Cas9-sgRNA-DNA ternary complex in the presence of magnesium | monomer | |||||
| Assess | ||||||
| Conformational states of Cas9-sgRNA-DNA ternary complex in the presence of magnesium | monomer | |||||
| Assess | ||||||
| Cryo-EM structure of Cas9 in complex with 12-14MM DNA substrate, 5 minute time-point | monomer | |||||
| Assess | ||||||
| Conformational states of Cas9-sgRNA-DNA ternary complex in the presence of magnesium | monomer | |||||
| Assess | ||||||
| Cas9:gRNA in complex with 18-20MM DNA, 1 minute time-point, kinked active conformation | monomer | 5×MG; | ||||
| Assess | ||||||
| Cas9 bound to 12-14MM DNA, 60 min time-point, kinked conformation | monomer | |||||
| Assess | ||||||
| Cas9:sgRNA (S. pyogenes) in the open-protein conformation | monomer | |||||
| Assess | ||||||
| SpCas9 bound to 16-nucleotide complementary DNA substrate | monomer | 2×K; | ||||
| Assess | ||||||
| SpCas9 bound to 18-nucleotide complementary DNA substrate in the checkpoint state | monomer | 1×MG; 2×K; | ||||
| Assess | ||||||
| Crystal structure of the Streptococcus pyogenes Cas9 VQR variant in complex with sgRNA and target D… | monomer | 11×K; 3×MG; 4×EDO; 1×ACT; | ||||
| Assess | ||||||
| Crystal structure of the Streptococcus pyogenes Cas9 EQR variant in complex with sgRNA and target D… | monomer | 11×K; 3×MG; 4×EDO; 1×ACT; | ||||
| Assess | ||||||
| Crystal structure of SpCas9 variant EQR bound to sgRNA and TGAG PAM target DNA | monomer | 2×MG; 10×K; | ||||
| Assess | ||||||
| Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA | monomer | 2×MG; 11×K; | ||||
| Assess | ||||||
| Crystal structure of xCas9 in complex with sgRNA and target DNA (GAT PAM) | monomer | |||||
| Assess | ||||||
| Crystal structure of xCas9 in complex with sgRNA and target DNA (AAG PAM) | monomer | |||||
| Assess | ||||||
| Crystal structure of xCas9 in complex with sgRNA and DNA (TGC PAM) | monomer | |||||
| Assess | ||||||
| Crystal structure of catalytically-active Streptococcus pyogenes CRISPR-Cas9 in complex with single… | monomer | 3×SO4; | ||||
| Assess | ||||||
| Cas9:sgRNA:DNA (S. pyogenes) forming a 3-base-pair R-loop | monomer | |||||
| Assess | ||||||
| Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, open-protein/linear-DNA conformation | monomer | |||||
| Assess | ||||||
| SpCas9 with dual-guide RNA and target DNA | monomer | |||||
| Assess | ||||||
| Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, closed-protein/bent-DNA conformation | monomer | |||||
| Assess | ||||||
| Crystal structure of Cas9-sgRNA-DNA complex solved by native SAD phasing | monomer | 2×MG; 13×K; | ||||
| Assess | ||||||
| Crystal structure of Cas9 bound to PAM-containing DNA target with mismatches at positions 1-2 | monomer | 8×MG; | ||||
| Assess | ||||||
| Crystal structure of Cas9 bound to PAM-containing DNA target containing mismatches at positions 1-3 | monomer | 8×MG; | ||||
| Assess | ||||||
| Crystal structure of SpyCas9 variant VQR bound to sgRNA and TGAG PAM target DNA | monomer | 13×K; 2×MG; | ||||
| Assess | ||||||
| Crystal structure of Cas9 bound to PAM-containing DNA target | monomer | 8×MG; | ||||
| Assess | ||||||
| Crystal structure of dCas9 in complex with sgRNA and DNA (CGA PAM) | monomer | |||||
| Assess | ||||||
| Crystal structure of dCas9 in complex with sgRNA and DNA (TGA PAM) | monomer | |||||
| Assess | ||||||
| SpCas9 with sgRNA and target DNA | monomer | |||||
| Assess | ||||||
| Crystal structure of S. pyogenes Cas9 | monomer | 2×SO4; | ||||
| Assess | ||||||
| Crystal structure of Mn-bound S.pyogenes Cas9 | monomer | 7×MN; 3×SO4; | ||||
| Assess | ||||||
| Rec3 Domain from S. pyogenes Cas9 | monomer | 5×EDO; | ||||
| Assess | ||||||
| HNH Nuclease from S. pyogenes Cas9 | monomer | |||||
| Assess | ||||||
4 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 6ifo.1.A | monomer | 0.85 | 100.00 | |||
| Assess | ||||||
| 7z4l.1.B | monomer | 0.85 | 100.00 | |||
| Assess | ||||||
| 7s4x.1.A | monomer | 0.82 | 100.00 | |||
| Assess | ||||||
| 7s37.1.A | monomer | 0.62 | 100.00 | |||
| Assess | ||||||