Filter results by: Taxon Proteome
1 - 50 of 5917324 UniProtKB matches
(233567 models, 1782756 structures.)
UniProtKB AC
(Name)		UniProtKB Section
 
Homology Model
 
Experimental Structure 		OrganismDescription
Q8NHP7
(EXD1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		piRNA biogenesis protein EXD1;
Exonuclease 3'-5' domain-containing protein 1;
Exonuclease 3'-5' domain-like-containing protein 1;
Inactive exonuclease EXD1;
Q96T21
(SEBP2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Selenocysteine insertion sequence-binding protein 2;
Q12849
(GRSF1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		G-rich sequence factor 1;
Q5JQF8
(PAP1M_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Polyadenylate-binding protein 1-like 2;
RNA-binding motif protein 32;
RNA-binding protein 32;
Q93062
(RBPMS_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein with multiple splicing;
Heart and RRM expressed sequence;
P30876
(RPB2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		DNA-directed RNA polymerase II subunit RPB2;
3'-5' exoribonuclease;
DNA-directed RNA polymerase II 140 kDa polypeptide;
DNA-directed RNA polymerase II subunit B;
RNA polymerase II subunit 2;
RNA polymerase II subunit B2;
RNA-directed RNA polymerase II subunit RPB2;
Q6ZP01
(RBM44_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein 44;
RNA-binding motif protein 44;
Q7Z3Z3
(PIWL3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Piwi-like protein 3;
Q9HCK5
(AGO4_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Protein argonaute-4;
Argonaute RISC catalytic component 4;
Eukaryotic translation initiation factor 2C 4;
A6NDY0
(EPAB2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Embryonic polyadenylate-binding protein 2;
Embryonic poly(A)-binding protein type II;
Poly(A)-binding protein nuclear-like 1;
Q659C4
(LAR1B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		La-related protein 1B;
La ribonucleoprotein domain family member 1B;
La ribonucleoprotein domain family member 2;
La-related protein 2;
Q4VXU2
(PAP1L_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Polyadenylate-binding protein 1-like;
Q15633
(TRBP2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RISC-loading complex subunit TARBP2;
TAR RNA-binding protein 2;
Trans-activation-responsive RNA-binding protein;
Q5VZ19
(TDR10_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Tudor domain-containing protein 10;
Q2M296
(MTHSD_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Methenyltetrahydrofolate synthase domain-containing protein;
Q6XE24
(RBMS3_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding motif, single-stranded-interacting protein 3;
Q86U38
(NOP9_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Nucleolar protein 9;
Q9BTF0
(THUM2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		THUMP domain-containing protein 2;
A6NMK7
(CPS4L_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Putative cleavage and polyadenylation specificity factor subunit 4-like protein;
Q9HCJ0
(TNR6C_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Trinucleotide repeat-containing gene 6C protein;
Q12926
(ELAV2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		ELAV-like protein 2;
ELAV-like neuronal protein 1;
Hu-antigen B;
Nervous system-specific RNA-binding protein Hel-N1;
Q7Z3Z4
(PIWL4_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Piwi-like protein 4;
Q86SE5
(RALYL_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding Raly-like protein;
Heterogeneous nuclear ribonucleoprotein C-like 3;
Q9GZM3
(RPB1B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		DNA-directed RNA polymerase II subunit RPB11-b1;
DNA-directed RNA polymerase II subunit J2;
Q5T8I9
(HENMT_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Small RNA 2'-O-methyltransferase;
HEN1 methyltransferase homolog 1;
Q6ZN17
(LN28B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Protein lin-28 homolog B;
O75153
(CLU_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Clustered mitochondria protein homolog;
Q96DU9
(PABP5_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Polyadenylate-binding protein 5;
Q8NDV7
(TNR6A_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Trinucleotide repeat-containing gene 6A protein;
CAG repeat protein 26;
EMSY interactor protein;
GW182 autoantigen;
Glycine-tryptophan protein of 182 kDa;
Q9Y2W6
(TDRKH_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Tudor and KH domain-containing protein;
Tudor domain-containing protein 2;
O00370
(LORF2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		LINE-1 retrotransposable element ORF2 protein;
Reverse transcriptase;
2.7.7.49;
Endonuclease;
3.1.21.-;
Q8WXF0
(SRS12_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Serine/arginine-rich splicing factor 12;
35 kDa SR repressor protein;
Splicing factor, arginine/serine-rich 13B;
Splicing factor, arginine/serine-rich 19;
Q5BLP8
(NICOL_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		NELL2-interacting cell ontogeny regulator 1;
NELL2-interacting cofactor for lumicrine signaling;
P0C7P1
(RBY1D_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding motif protein, Y chromosome, family 1 member D;
O43347
(MSI1H_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein Musashi homolog 1;
O75569
(PRKRA_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Interferon-inducible double-stranded RNA-dependent protein kinase activator A;
PKR-associated protein X;
PKR-associating protein X;
Protein activator of the interferon-induced protein kinase;
Protein kinase, interferon-inducible double-stranded RNA-dependent activator;
B0L3A2
(DESPR_HUMAN) 		Swiss-ProtHomo sapiens
(Human)		Dual endothelin-1/VEGF signal peptide receptor;
FBXW7 antisense RNA 1;
Q96IZ5
(RBM41_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA-binding protein 41;
RNA-binding motif protein 41;
Q9H9Z2
(LN28A_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Protein lin-28 homolog A;
Zinc finger CCHC domain-containing protein 1;
Q15415
(RBY1F_HUMAN) 		Swiss-ProtHomo sapiens
(Human)		RNA-binding motif protein, Y chromosome, family 1 member F/J;
Y chromosome RNA recognition motif 2;
Q9UPQ9
(TNR6B_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Trinucleotide repeat-containing gene 6B protein;
Q9UFF9
(CNOT8_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		CCR4-NOT transcription complex subunit 8;
CAF1-like protein;
CAF2;
CCR4-associated factor 8;
Caf1b;
Q96IC2
(REXO5_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		RNA exonuclease 5;
Exonuclease NEF-sp;
Q4VXA5
(KHDC1_HUMAN) 		Swiss-ProtHomo sapiens
(Human)		KH homology domain-containing protein 1;
Q8NCV1
(ADAD2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Adenosine deaminase domain-containing protein 2;
Testis nuclear RNA-binding protein-like;
Q86WS4
(RDIC1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Regulator of DNA class I crossover intermediates 1;
Q9P2I0
(CPSF2_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Cleavage and polyadenylation specificity factor subunit 2;
Cleavage and polyadenylation specificity factor 100 kDa subunit;
Q15365
(PCBP1_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Poly(rC)-binding protein 1;
Alpha-CP1;
Heterogeneous nuclear ribonucleoprotein E1;
Nucleic acid-binding protein SUB2.3;
P61571
(REC21_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Endogenous retrovirus group K member 21 Rec protein;
HERV-K_12q14.1 provirus Rec protein;
P61578
(REC16_HUMAN) 		Swiss-Prot
Homo sapiens
(Human)		Endogenous retrovirus group K member 16 Rec protein;
HERV-K_10p14 provirus Rec protein;
1 - 50 of 5917324

The SWISS-MODEL Repository is a database of annotated 3D protein structure models generated by the SWISS-MODEL homology-modelling pipeline.

Bienert S, Waterhouse A, de Beer TAP, Tauriello G, Studer G, Bordoli L, Schwede T
The SWISS-MODEL Repository - new features and functionality.
Nucleic Acids Res 45, D313-D319. (2017) PubMed logo27899672DOI logo10.1093/nar/gkw1132

The aim of the SWISS-MODEL Repository is to provide access to an up-to-date collection of annotated 3D protein models generated by automated homology modelling for relevant model organisms and experimental structure information for all sequences in UniProtKB. Regular updates ensure that target coverage is complete, that models are built using the most recent sequence and template structure databases, and that improvements in the underlying modelling pipeline are fully utilised. It also allows users to assess the quality of the models using the latest QMEAN results. If a sequence has not been modelled, the user can build models interactively via the SWISS-MODEL workspace.

Currently the repository contains 3,463,393 models from SWISS-MODEL for UniProtKB targets as well as 218,360 structures from PDB with mapping to UniProtKB.

We currently provide models for the reference proteomes of the following model organisms, based on UniProtKB release 2025_01. If you want to download a large number of models, please contact us.

Proteome SizeSequences ModelledModelsSeq CoverageMetadata
(Homology models and
experimental structures)		Coordinates
(Homology models only)
Homo sapiens20,64417,56843,323
14.9 MB5.7 GB
Mus musculus21,75519,04143,690
7.8 MB4.0 GB
Caenorhabditis elegans19,82413,13523,409
3.6 MB1.7 GB
Escherichia coli4,4023,7306,298
2.2 MB496.5 MB
Arabidopsis thaliana27,44820,59838,175
5.5 MB2.7 GB
Drosophila melanogaster13,82210,20319,807
3.1 MB1.7 GB
Saccharomyces cerevisiae6,0654,7188,617
2.3 MB613.0 MB
Schizosaccharomyces pombe5,2614,3638,285
1.2 MB601.8 MB
Caulobacter vibrioides3,7202,9844,993
704.2 KB384.2 MB
Mycobacterium tuberculosis3,9963,3045,240
957.1 KB387.1 MB
Pseudomonas aeruginosa5,5634,8228,688
1.3 MB725.4 MB
Staphylococcus aureus2,8892,3773,788
608.9 KB257.3 MB
Plasmodium falciparum5,3613,7366,699
996.9 KB419.7 MB
Latest snapshot of SMR was taken 1 month, 3 weeks ago.