- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- hetero-2-2-2-2-mer
- Ligands
- 14 x MN: MANGANESE (II) ION(Non-functional Binders)(Non-covalent)
MN.1: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MN.2: 1 residues within 4Å:- Chain A: G.122
No protein-ligand interaction detected (PLIP)MN.3: 1 residues within 4Å:- Chain A: G.135
No protein-ligand interaction detected (PLIP)MN.4: 1 residues within 4Å:- Chain A: G.101
No protein-ligand interaction detected (PLIP)MN.5: 2 residues within 4Å:- Chain A: G.79
- Chain B: C.69
No protein-ligand interaction detected (PLIP)MN.6: 2 residues within 4Å:- Chain A: G.71, G.72
No protein-ligand interaction detected (PLIP)MN.7: 2 residues within 4Å:- Chain A: G.39, G.40
No protein-ligand interaction detected (PLIP)MN.8: 2 residues within 4Å:- Chain B: A.134, G.135
No protein-ligand interaction detected (PLIP)MN.9: 1 residues within 4Å:- Chain B: G.101
No protein-ligand interaction detected (PLIP)MN.10: 1 residues within 4Å:- Chain B: G.71
No protein-ligand interaction detected (PLIP)MN.11: 1 residues within 4Å:- Chain B: G.122
No protein-ligand interaction detected (PLIP)MN.12: 2 residues within 4Å:- Chain B: G.39, G.40
No protein-ligand interaction detected (PLIP)MN.13: 1 residues within 4Å:- Chain B: G.79
No protein-ligand interaction detected (PLIP)MN.16: 1 residues within 4Å:- Chain G: D.77
5 PLIP interactions:1 interactions with chain G, 4 Ligand-Water interactions- Metal complexes: G:D.77, H2O.92, H2O.93, H2O.93, H2O.101
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.14: 3 residues within 4Å:- Chain C: M.120, P.121, K.122
Ligand excluded by PLIPCL.15: 6 residues within 4Å:- Chain E: G.44, A.45, G.46, A.47
- Chain F: T.90, S.91
Ligand excluded by PLIPCL.17: 3 residues within 4Å:- Chain G: M.120, P.121, K.122
Ligand excluded by PLIPCL.18: 6 residues within 4Å:- Chain I: G.44, A.45, G.46, A.47
- Chain J: T.90, S.91
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Davey, C.A. et al., Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution. J.Mol.Biol. (2002)
- Release Date
- 2002-12-25
- Peptides
- histone H3: CG
histone H4: DH
histone H2A.1: EI
histone H2B.2: FJ - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:C
AG
ED
BH
FE
CI
GF
DJ
H
SMTL ID : 1kx5.1
X-Ray Structure of the Nucleosome Core Particle, NCP147, at 1.9 A Resolution
histone H3
Toggle Identical (CG)histone H4
Toggle Identical (DH)histone H2A.1
Toggle Identical (EI)histone H2B.2
Toggle Identical (FJ)Related Entries With Identical Sequence
1kx3.1 | 1kx4.1 | 1m18.1 | 1m19.1 | 1m1a.1 | 1p34.1 | 1p3a.1 | 1p3k.1 | 1p3l.1 | 1p3m.1 | 1s32.1 | 1zbb.1 | 1zla.1 | 2fj7.1 | 2io5.1 | 2nzd.1 | 3b6f.1 | 3b6g.1 | 3c1b.1 | 3c1c.1 | 3c9k.1 | 3c9k.2 | 3kuy.1 | 3kxb.1 | 3lel.1 | 3lel.2 | 3lja.1 | 3lz0.1 | 3lz1.1 | 3mgp.1 more...less...3mgq.1 | 3mgr.1 | 3mgs.1 | 3mnn.1 | 3mvd.1 | 3o62.1 | 3reh.1 | 3rei.1 | 3rej.1 | 3rek.1 | 3rel.1 | 3tu4.1 | 3tu4.2 | 3ut9.1 | 3uta.1 | 3utb.1 | 3x1s.1 | 3x1t.1 | 3x1u.1 | 3x1v.1 | 4h9n.1 | 4h9o.1 | 4h9p.1 | 4h9p.2 | 4h9q.1 | 4h9q.2 | 4h9r.1 | 4h9r.2 | 4j8u.1 | 4j8v.1 | 4j8v.2 | 4j8v.3 | 4j8w.1 | 4j8x.1 | 4j8x.2 | 4j8x.3 | 4r8p.1 | 4wu8.1 | 4wu9.1 | 4xuj.1 | 5bnv.1 | 5bnx.1 | 5bo0.1 | 5bs7.1 | 5bsa.1 | 5cp6.1 | 5dnm.1 | 5dnn.1 | 5gsu.1 | 5gt0.1 | 5gt3.1 | 5hq2.1 | 5ja4.1 | 5kdm.1 | 5nl0.1 | 5nl0.2 | 5oxv.1 | 5oy7.1 | 5x0x.1 | 5x0y.1 | 5xf6.1 | 5z3l.1 | 5z3o.1 | 5z3u.1 | 5z3v.1 | 6esf.1 | 6esg.1 | 6esh.1 | 6esi.1 | 6fml.1 | 6iro.1 | 6jyl.1 | 6k1p.1 | 6kiu.1 | 6kiv.1 | 6kiw.1 | 6kix.1 | 6kiz.1 | 6nj9.1 | 6nn6.1 | 6nog.1 | 6nqa.1 | 6o96.1 | 6om3.1 | 6om3.2 | 6pa7.1 | 6r1u.1 | 6r25.1 | 6s01.1 | 6t9l.1 | 6tda.1 | 6ugm.1 | 6uh5.1 | 6uxw.1 | 6ven.1 | 6vyp.1 | 6vyp.2 | 6wz5.1 | 6wz9.1 | 6x0n.1 | 6x59.1 | 6x5a.1 | 6xjd.1 | 7a08.1 | 7at8.1 | 7bwd.1 | 7ciz.1 | 7ciz.2 | 7ciz.3 | 7cj0.1 | 7cj0.2 | 7cro.1 | 7crp.1 | 7crq.1 | 7crr.1 | 7e8d.1 | 7e8i.1 | 7eg6.1 | 7egp.1 | 7enn.1 | 7jzv.1 | 7oh9.1 | 7oha.1 | 7ohb.1 | 7ohc.1 | 7ssa.1 | 7swy.1 | 7tn2.1 | 7u50.1 | 7u51.1 | 7u52.1 | 7u53.1 | 7uv9.1 | 7v1m.1 | 7v1m.2 | 7xpx.1 | 7y8r.1 | 7yi1.1 | 7yi4.1 | 7yi5.1 | 7zs9.1 | 7zsa.1 | 7zsb.1 | 8atf.1 | 8av6.1 | 8cbn.1 | 8cbq.1 | 8ceo.1 | 8cww.1 | 8cze.1 | 8f86.1 | 8g86.1 | 8g88.1 | 8g8b.1 | 8g8g.1 | 8gui.1 | 8guj.1 | 8guk.1 | 8hag.1 | 8hah.1 | 8hai.1 | 8haj.1 | 8hak.1 | 8hal.1 | 8ham.1 | 8han.1 | 8hxy.1 | 8hxz.1 | 8hy0.1 | 8ihm.1 | 8iht.1 | 8jbx.1 | 8jcc.1 | 8jcd.1 | 8jho.1 | 8kd2.1 | 8kd3.1 | 8kd4.1 | 8kd5.1 | 8kd6.1 | 8kd7.1 | 8oo7.1 | 8ooa.1 | 8oop.1 | 8oos.1 | 8pc5.1 | 8pc6.1 | 8peo.1 | 8pep.1 | 8qzm.1 | 8rgm.1 | 8rup.1 | 8ruq.1 | 8siy.1 | 8t3t.1 | 8t3w.1 | 8t3y.1 | 8t9f.1 | 8t9h.1 | 8thu.1 | 8uxq.1 | 8v4y.1 | 8v6v.1 | 8v7l.1 | 8vws.1 | 8vwt.1 | 8vwu.1 | 8vwv.1 | 8xrj.1 | 8xvs.1 | 8yv8.1 | 9ca7.1 | 9ca8.1 | 9caa.1 | 9cab.1 | 9cg9.1 | 9dwf.1 | 9dwg.1 | 9dwh.1 | 9dwi.1 | 9dwj.1 | 9dwk.1 | 9dwl.1 | 9dwm.1 | 9eil.1 | 9eoz.1 | 9gxa.1 | 9ipu.1 | 9jnp.1 | 9jnt.1 | 9jnu.1 | 9jnv.1 | 9jnw.1 | 9jnx.1 | 9jnz.1 | 9jo2.1 | 9jo5.1 | 9l1x.1 | 9l22.1 | 9liu.1 | 9nqu.1 | 9qaj.1