SMTL ID : 1yok.1

crystal structure of human LRH-1 bound with TIF-2 peptide and phosphatidylglycerol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-2-mer

Ligands

1 x P6L: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE(Non-covalent)

P6L.1: 20 residues within 4Å: Chain A: T.56, F.57, M.60, I.102, H.105, I.130, I.131, Q.134, A.135, G.136, A.137, T.138, L.139, L.142, A.146, A.228, Y.231, Y.234, K.235, L.247 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:T.56, A:M.60, A:H.105, A:I.131, A:L.139, A:L.142, A:A.146, A:A.228, A:A.228, A:Y.231, A:Y.231, A:L.247 Hydrogen bonds: A:G.136, A:G.136, A:A.137, A:T.138, A:L.139, A:Y.231 Water bridges: A:K.235, A:K.235 Salt bridges: A:K.235

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krylova, I.N. et al., Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1. Cell(Cambridge,Mass.) (2005)

Release Date

2005-07-19

Peptides

Orphan nuclear receptor NR5A2: A
Nuclear receptor coactivator 2: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Orphan nuclear receptor NR5A2

Nuclear receptor coactivator 2

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