SMTL ID : 7tt8.1

Human LRH-1 LBD bound to agonist 6N-10CA and fragment of Tif2 coactivator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x IUW: 10-[(3aR,6S,6aR)-3-phenyl-3a-(1-phenylethenyl)-6-(sulfamoylamino)-1,3a,4,5,6,6a-hexahydropentalen-2-yl]decanoic acid (non-preferred name)(Non-covalent)

IUW.1: 29 residues within 4Å: Chain A: T.46, F.47, M.50, C.51, M.53, A.54, T.57, L.91, I.92, H.95, R.98, I.108, L.110, V.111, T.112, I.121, Q.124, A.125, G.126, L.129, L.132, M.133, A.136, I.214, A.218, Y.221, L.222, K.225, L.237 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:F.47, A:F.47, A:F.47, A:M.50, A:I.92, A:H.95, A:I.121, A:L.129, A:L.132, A:A.136, A:L.222, A:L.222 Hydrogen bonds: A:M.50, A:T.57, A:V.111, A:G.126, A:Y.221 Water bridges: A:R.98, A:R.98 Salt bridges: A:K.225 pi-Stacking: A:H.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cato, M.L. et al., Differential Modulation of Nuclear Receptor LRH-1 through Targeting Buried and Surface Regions of the Binding Pocket. J.Med.Chem. (2022)

Release Date

2022-05-11

Peptides

Nuclear receptor subfamily 5 group A member 2: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Nuclear receptor subfamily 5 group A member 2

Nuclear receptor coactivator 2

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