SMTL ID : 3up0.2 (1 other biounit)

Nuclear receptor DAF-12 from hookworm Ancylostoma ceylanicum in complex with (25S)-delta7-dafachronic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x D7S: (5beta,14beta,17alpha,25S)-3-oxocholest-7-en-26-oic acid(Non-covalent)

D7S.1: 18 residues within 4Å: Chain A: M.27, I.49, M.50, V.52, T.53, L.87, T.88, R.90, G.91, W.102, T.104, P.105, T.106, M.117, F.118, Q.129, I.215, L.222 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.49, A:V.52, A:L.87, A:L.87, A:R.90, A:W.102, A:I.215, A:L.222 Hydrogen bonds: A:T.104, A:T.104, A:Q.129 Water bridges: A:R.90 Salt bridges: A:R.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhi, X. et al., Structural Conservation of Ligand Binding Reveals a Bile Acid-like Signaling Pathway in Nematodes. J.Biol.Chem. (2012)

Release Date

2011-12-14

Peptides

aceDAF-12: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
Q

aceDAF-12

Nuclear receptor coactivator 2

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