SMTL ID : 4ple.1 (3 other biounits)

Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, Bound to an E. Coli Phospholipid and a Fragment of TIF-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EPH: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE(Non-covalent)

EPH.1: 23 residues within 4Å: Chain A: T.45, F.46, M.49, C.50, A.53, S.87, L.90, I.91, H.94, I.119, I.120, Q.123, A.124, G.125, L.128, L.131, M.132, A.135, A.217, E.218, Y.220, K.224, L.236 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:T.45, A:F.46, A:F.46, A:M.49, A:A.53, A:I.91, A:H.94, A:I.119, A:I.120, A:L.128, A:L.131, A:L.131, A:A.135, A:Y.220, A:L.236 Hydrogen bonds: A:G.125, A:Y.220, A:Y.220 Salt bridges: A:K.224

3 x CPS: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE(Non-covalent)

CPS.2: 11 residues within 4Å: Chain A: M.27, L.30, Q.31, Q.34, T.45, L.48, M.49, L.109, T.111, Q.113, V.115 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.30, A:Q.31, A:T.45, A:L.48, A:L.109 CPS.3: 4 residues within 4Å: Chain A: E.218, Y.222, Y.223, L.240 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.222, A:Y.222, A:Y.222, A:Y.223 Hydrogen bonds: A:E.218 CPS.4: 3 residues within 4Å: Chain A: T.127, E.219, Y.223 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.219, A:Y.223, A:Y.223, A:Y.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Musille, P.M. et al., Unexpected Allosteric Network Contributes to LRH-1 Co-regulator Selectivity. J.Biol.Chem. (2016)

Release Date

2015-12-16

Peptides

Nuclear receptor subfamily 5 group A member 2: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear receptor subfamily 5 group A member 2

Nuclear receptor coactivator 2

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