SMTL ID : 4ple.3 (3 other biounits)

Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, Bound to an E. Coli Phospholipid and a Fragment of TIF-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EPH: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE(Non-covalent)

EPH.1: 23 residues within 4Å: Chain A: T.45, F.46, M.49, A.53, W.86, L.90, I.91, H.94, I.107, V.115, I.119, I.120, Q.123, A.124, G.125, L.128, L.131, M.132, A.135, A.217, E.218, Y.220, K.224 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:T.45, A:F.46, A:M.49, A:A.53, A:W.86, A:L.90, A:I.107, A:V.115, A:I.119, A:I.120, A:I.120, A:L.128, A:L.128, A:L.131, A:A.135, A:E.218, A:Y.220 Hydrogen bonds: A:G.125, A:Y.220, A:Y.220 Salt bridges: A:K.224

5 x CPS: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE(Non-covalent)

CPS.2: 7 residues within 4Å: Chain A: L.163, E.175, Q.178, E.179, N.182, L.186 Ligands: CPS.4 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.163, A:Q.178, A:E.179, A:N.182, A:L.186 Hydrogen bonds: A:E.175, A:E.175, A:E.179, A:E.179 CPS.3: 4 residues within 4Å: Chain A: T.127, E.219, Y.223 Ligands: CPS.6 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:E.219, A:Y.223, A:Y.223, A:Y.223 Water bridges: A:E.219 CPS.4: 2 residues within 4Å: Chain A: L.186 Ligands: CPS.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.186 Hydrogen bonds: A:E.198 CPS.5: 9 residues within 4Å: Chain A: L.30, Q.31, Q.34, L.48, M.49, L.109, T.111, Q.113, V.115 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.30, A:Q.31, A:L.48, A:L.109, A:V.115 Water bridges: A:Q.31 CPS.6: 4 residues within 4Å: Chain A: Y.222, Y.223, L.240 Ligands: CPS.3 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.222, A:Y.222, A:Y.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Musille, P.M. et al., Unexpected Allosteric Network Contributes to LRH-1 Co-regulator Selectivity. J.Biol.Chem. (2016)

Release Date

2015-12-16

Peptides

Nuclear receptor subfamily 5 group A member 2: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Nuclear receptor subfamily 5 group A member 2

Nuclear receptor coactivator 2

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