SMTL ID : 5nft.1

Glucocorticoid Receptor in complex with AZD5423

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: P.44, A.77, W.80, L.106, K.170 No protein-ligand interaction detected (PLIP) EDO.2: 3 residues within 4Å: Chain A: H.148, Y.151, N.234 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.148, A:N.234 EDO.3: 2 residues within 4Å: Chain A: P.253, E.254 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.254 Water bridges: A:M.255

1 x 8W8: 2,2,2-tris(fluoranyl)-~{N}-[(1~{R},2~{S})-1-[1-(4-fluorophenyl)indazol-5-yl]oxy-1-(3-methoxyphenyl)propan-2-yl]ethanamide(Non-covalent)

8W8.4: 20 residues within 4Å: Chain A: M.63, L.66, N.67, L.69, G.70, Q.73, M.104, M.107, A.110, L.111, R.114, F.126, M.142, Q.145, M.149, Y.238, C.239, T.242, F.252, L.256 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.66, A:M.107, A:A.110, A:L.111, A:Q.145, A:L.256 Hydrogen bonds: A:N.67, A:Q.73, A:Q.145 pi-Stacking: A:F.126, A:F.126, A:F.126 Halogen bonds: A:N.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hemmerling, M. et al., Selective Nonsteroidal Glucocorticoid Receptor Modulators for the Inhaled Treatment of Pulmonary Diseases. J. Med. Chem. (2017)

Release Date

2017-10-04

Peptides

Glucocorticoid receptor: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucocorticoid receptor

Nuclear receptor coactivator 2

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