SMTL ID : 5g3j.1

Discovery of New Selective Glucocorticoid Receptor Agonist Leads

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CPS: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE(Non-covalent)

CPS.1: 9 residues within 4Å: Chain A: T.59, W.60, M.63, D.141, D.144, Y.238, Q.241, T.242, M.248 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.59, A:D.141, A:Y.238, A:T.242, A:M.248 Salt bridges: A:D.144

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: P.44, A.77, W.80, L.106, K.170 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.73

1 x E7T: 5-[[(1S,2R,4R)-4-ethyl-6,7-bis(fluoranyl)-2,5-bis(oxidanyl)-2-(trifluoromethyl)-3,4-dihydro-1H-naphthalen-1-yl]amino]-1H-quinolin-2-one(Non-covalent)

E7T.3: 22 residues within 4Å: Chain A: M.63, L.66, N.67, L.69, G.70, Q.73, W.103, M.104, M.107, A.108, L.111, R.114, F.126, M.142, Q.145, C.146, M.149, Y.238, C.239, T.242, F.252, L.256 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.66, A:L.69, A:M.107, A:L.111, A:Y.238, A:T.242 Hydrogen bonds: A:M.63, A:Q.73, A:M.107, A:R.114, A:Q.145 Water bridges: A:R.114 pi-Stacking: A:F.126, A:F.126 Halogen bonds: A:C.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Berger, M. et al., Discovery of New Selective Glucocorticoid Receptor Agonist Leads. Bioorg.Med.Chem.Lett. (2017)

Release Date

2017-02-15

Peptides

GLUCOCORTICOID RECEPTOR: A
NUCLEAR RECEPTOR COACTIVATOR 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

GLUCOCORTICOID RECEPTOR

NUCLEAR RECEPTOR COACTIVATOR 2

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