SMTL ID : 6el9.1

Glucocorticoid Receptor in complex with AZD9567

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: P.44, W.80, L.106, M.107, A.110, K.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.106

1 x B9W: 2,2-bis(fluoranyl)-~{N}-[(1~{R},2~{S})-3-methyl-1-[1-(1-methyl-6-oxidanylidene-pyridin-3-yl)indazol-5-yl]oxy-1-phenyl-butan-2-yl]propanamide(Non-covalent)

B9W.2: 20 residues within 4Å: Chain A: M.63, L.66, N.67, L.69, G.70, Q.73, W.103, M.107, A.110, L.111, R.114, C.125, F.126, Q.145, M.149, Y.238, C.239, T.242, F.252, L.256 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.66, A:L.66, A:Q.73, A:W.103, A:W.103, A:M.107, A:A.110, A:F.252, A:L.256 Hydrogen bonds: A:N.67, A:Q.73 Water bridges: A:R.114, A:R.114 pi-Stacking: A:F.126, A:F.126 Halogen bonds: A:N.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ripa, L. et al., Discovery of a Novel Oral Glucocorticoid Receptor Modulator (AZD9567) with Improved Side Effect Profile. J. Med. Chem. (2018)

Release Date

2018-02-21

Peptides

Glucocorticoid receptor: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucocorticoid receptor

Nuclear receptor coactivator 2

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