- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.62 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.3: 4 residues within 4Å:- Chain A: R.239, E.333, S.336, L.337
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.333, A:S.336
- Water bridges: A:S.336
- Salt bridges: A:R.239
ACT.11: 4 residues within 4Å:- Chain B: R.239, E.333, S.336, L.337
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.336
- Water bridges: B:S.336
- Salt bridges: B:R.239
- 4 x ZN: ZINC ION(Non-covalent)
ZN.5: 2 residues within 4Å:- Chain A: D.100, D.104
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:D.100, A:D.104, H2O.2, H2O.3, H2O.3
ZN.6: 1 residues within 4Å:- Chain A: D.252
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:D.252, H2O.1, H2O.3, H2O.3, H2O.7
ZN.13: 2 residues within 4Å:- Chain B: D.100, D.104
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:D.100, B:D.104, H2O.14, H2O.15, H2O.16
ZN.14: 1 residues within 4Å:- Chain B: D.252
5 PLIP interactions:1 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: B:D.252, H2O.14, H2O.15, H2O.15, H2O.19
- 4 x AYV: 1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-urea(Non-covalent)
AYV.7: 9 residues within 4Å:- Chain A: K.50, F.52, R.110, Y.215, F.248, K.358, T.359, R.362
- Ligands: SO4.1
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:F.52, A:F.248
- Hydrogen bonds: A:R.110, A:R.362
- Water bridges: A:R.110, A:R.110, A:D.252, A:R.362
- pi-Stacking: A:F.52
- pi-Cation interactions: A:R.362
AYV.8: 10 residues within 4Å:- Chain A: P.199, Y.202, K.203, L.243, E.246, W.278, V.281, Y.326, E.329, E.333
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:P.199, A:Y.202, A:V.281
- Hydrogen bonds: A:E.246, A:E.246
AYV.15: 9 residues within 4Å:- Chain B: K.50, F.52, R.110, Y.215, F.248, K.358, T.359, R.362
- Ligands: SO4.9
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:F.52, B:F.248
- Hydrogen bonds: B:R.110, B:R.362
- Water bridges: B:R.110, B:R.110, B:D.252, B:R.362
- pi-Stacking: B:F.52
- pi-Cation interactions: B:R.362
AYV.16: 10 residues within 4Å:- Chain B: P.199, Y.202, K.203, L.243, E.246, W.278, V.281, Y.326, E.329, E.333
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:P.199, B:Y.202, B:V.281
- Hydrogen bonds: B:E.246, B:E.246
- Water bridges: B:Y.326
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Petrick, J.K. et al., PanDDA analysis group deposition - FPPS screened against the DSI Fragment Library. To Be Published
- Release Date
- 2020-04-29
- Peptides
- Farnesyl diphosphate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.62 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x AYV: 1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-urea(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Petrick, J.K. et al., PanDDA analysis group deposition - FPPS screened against the DSI Fragment Library. To Be Published
- Release Date
- 2020-04-29
- Peptides
- Farnesyl diphosphate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A