SMTL ID : 5xgy.1

Crystal structure of peptidoglycan recognition protein (PGRP-S) at 2.45 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-tetramer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain C: P.151, T.152, L.153 Chain D: H.37, T.38, A.39, Y.71, H.146 Ligands: TLA.2 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain D Hydrogen bonds: C:L.153, D:T.38, D:Y.71

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.2: 11 residues within 4Å: Chain C: H.37, A.39, T.152, L.153, S.154 Chain D: H.37, A.39, T.152, L.153, S.154 Ligands: GOL.1 9 PLIP interactions: 4 interactions with chain D, 5 interactions with chain C Hydrogen bonds: D:T.152, D:L.153, D:S.154, C:T.152, C:L.153, C:S.154 Salt bridges: D:H.37, C:H.37 Water bridges: C:H.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shokeen, A. et al., Crystal structure of peptidoglycan recognition protein (PGRP-S) at 2.45 A resolution. To Be Published

Release Date

2017-05-03

Peptides

Peptidoglycan recognition protein 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Peptidoglycan recognition protein 1

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