SMTL ID : 7snp.1

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-3-(3-chloro-5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-(2-morpholinoethoxy)phenoxy)phenyl)acrylonitrile (JLJ530)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 9UV: (2E)-3-(3-chloro-5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-[2-(morpholin-4-yl)ethoxy]phenoxy}phenyl)prop-2-enenitrile(Non-covalent)

9UV.1: 17 residues within 4Å: Chain A: P.97, L.102, K.103, K.104, K.105, V.108, V.110, V.181, Y.183, Y.190, P.227, F.229, W.231, L.236, H.237, P.238, Y.320 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.102, A:V.108, A:V.110, A:Y.183, A:Y.183, A:Y.190, A:Y.190, A:Y.190, A:Y.190, A:Y.190, A:W.231, A:L.236, A:L.236 Hydrogen bonds: A:K.105, A:K.105 pi-Stacking: A:W.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frey, K.M. et al., Structural Studies and Structure Activity Relationships for Novel Computationally Designed Non-nucleoside Inhibitors and Their Interactions With HIV-1 Reverse Transcriptase. Front Mol Biosci (2022)

Release Date

2022-03-16

Peptides

Reverse transcriptase p66: A
p51 RT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase p66

p51 RT

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