SMTL ID : 8xgm.1

Cryo-EM structure of human GPR1 bound to chemerin

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 9 residues within 4Å: Chain B: K.56, L.61, L.64, N.65, I.68, I.72, L.106, L.142, I.146 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:L.64, B:I.68, B:L.106, B:L.142, B:I.146 Hydrogen bonds: B:K.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, A. et al., Structure of G protein-coupled receptor GPR1 bound to full-length chemerin adipokine reveals a chemokine-like reverse binding mode. Plos Biol. (2024)

Release Date

2024-08-21

Peptides

scFV16: A
G-protein coupled receptor 1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: C
Guanine nucleotide-binding protein G(i) subunit alpha-1: D
Guanine nucleotide-binding protein subunit gamma: E
Retinoic acid receptor responder protein 2: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
S

B
A

C
B

D
C

E
G

F
D

Membrane

We predict this structure to be a membrane protein.
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scFV16

G-protein coupled receptor 1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein subunit gamma

Retinoic acid receptor responder protein 2

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