P11609 | SWISS-MODEL Repository

P11609 (CD1D1_MOUSE) Mus musculus (Mouse)

Antigen-presenting glycoprotein CD1d1 UniProtKB InterPro STRING Interactive Modelling

It is possible new templates exist for this target since these models were created.

Available Structures

100 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Crystal structure of mouse CD1d in complex with the p99p lipopeptide	5efi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×CIT; 1×NA; 1×PLM; 1×OCA;
Download Compare Structure Assessment
Crystal structure of the mouse CD1d in complex with the p99 peptide	5fkp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	100.0	1×NAG; 2×NAG; 1×6UL; 4×GOL; 1×TAR;
Download Compare Structure Assessment
Structure of sphingomyelin in complex with mouse CD1d	6cyw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	100.0	1×NAG; 2×NAG; 1×FO4;
Download Compare Structure Assessment
Structure of alpha-GC[8,16P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cw9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	99.64	1×NAG; 1×NAG; 1×NAG; 1×PLM; 1×7LM;
Download Compare Structure Assessment
Structure of mouse CD1D- Glc-DAG (sn-1 C18:0, sn-2 C18:1c9)-iNKT TCR Ternary complex	6omg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	99.64	2×NAG; 1×NAG; 4×GOL; 5×NA; 1×MVV;
Download Compare Structure Assessment
Structure of glycolipid alpha-GSA[8,6P] in complex with mouse CD1d	6ojp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	99.25	1×NAG; 1×NAG; 2×NAG; 1×7LP; 1×PLM; 4×GOL; 1×SO4;
Download Compare Structure Assessment
Structure of the mouse CD1d-BnNH-GSL-1'-iNKT TCR complex	3quy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	100.0	1×NAG; 2×NAG; 1×QUY; 1×GOL;
Download Compare Structure Assessment
Crystal structure of mouse CD1d-alpha-phosphotidylinositol with mouse Valpha14-Vbeta6 2A3-D NKT TCR	3qi9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	99.64	1×NAG; 2×NAG; 1×PII; 1×MG; 2×GOL;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxs (JJ304) /iNKTCR ternary complex	6mji PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	24-297	100.0	1×NAG; 1×NAG; 2×NA; 6×GOL; 1×NAG; 1×JTD;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxo (JJ294) /iNKTCR ternary complex	6mja PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	24-297	100.0	1×NAG; 1×NAG; 2×NA; 3×GOL; 1×NAG; 1×JTJ;
Download Compare Structure Assessment
MHC-like protein complex structure	7m72 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer K7N5M4; K7N5N2; P01887;	24-297	99.64	2×NAG; 1×NAG; 1×QOD; 1×HP6;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxx (JJ166) /iNKTCR ternary complex	6mj6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	24-297	99.64	1×NAG; 1×NAG; 7×GOL; 3×NA; 1×NAG; 1×JTM;
Download Compare Structure Assessment
Crystal structure of the mCD1d/NC-aGC/iNKTCR ternary complex	4y16 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A2NTY6; P01848; P01887;	24-297	100.0	1×NAG; 1×NAG; 1×48G; 1×NAG;
Download Compare Structure Assessment
T-cell receptor and lipid complex structure	8t4z PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A2NTY6; K7N5M3; P01887; P0DTU4;	24-297	99.63	2×NAG; 1×NAG; 1×Y73;
Download Compare Structure Assessment
Ternary crystal structure of the NKT TCR-CD1d-alpha-galactosylceramide analogue-OCH	3arb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01850; P01887;	24-297	99.63	3×NAG; 2×PEG; 1×NAG; 1×FEE; 1×D12;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxa (JJ239)/iNKTCR ternary complex	6miy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	24-297	100.0	2×NAG; 1×NAG; 2×NA; 1×CL; 1×JTV; 2×GOL;
Download Compare Structure Assessment
MHC-like protein complex structure	6xng PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	99.64	2×NAG; 1×NAG; 2×V8P;
Download Compare Structure Assessment
Recognition of a Glycolipid Antigen by the iNKT Cell TCR	3o9w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A5B9; P01848; P01887;	24-297	99.64	1×NAG; 1×NAG; 1×NAG; 1×1O2;
Download Compare Structure Assessment
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-beta-galactosylceram…	3sda PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	24-297	99.64	1×NAG; 2×NAG; 1×GCY; 1×GOL;
Download Compare Structure Assessment
Structure of the mouse CD1d-PyrC-alpha-GalCer-iNKT TCR complex	4irs PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	24-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×1LA;
Download Compare Structure Assessment
Structure of the self-antigen iGb3 bound to mouse CD1d and in complex with the iNKT TCR	3rzc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	100.0	2×NAG; 1×NAG; 1×LGN;
Download Compare Structure Assessment
Crystal structure of the mCD1d/EF77/iNKTCR ternary complex	4y4k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A2NTY6; P01848; P01887;	24-297	100.0	1×NAG; 2×NAG; 1×49Y;
Download Compare Structure Assessment
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-sulfatide	4apq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	24-297	99.64	1×NAG; 1×NAG; 1×NAG; 1×CIS;
Download Compare Structure Assessment
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-beta-lactosylceramide	3sdd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	24-297	99.64	1×NAG; 2×NAG; 1×3GD;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxp (JJ295) /iNKTCR ternary complex	6mjq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	24-297	99.64	1×NAG; 1×NAG; 1×GOL; 1×NA; 1×NAG; 1×JUD;
Download Compare Structure Assessment
Ternary crystal structure of the mouse NKT TCR-CD1d-3'deoxy-alpha-galactosylceramide	3ard PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01850; P01887;	24-297	99.63	3×NAG; 1×3GH;
Download Compare Structure Assessment
Crystal structure of the mouse CD1d-C20:2-aGalCer-L363 mAb Fab complex	3ubx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-297	100.0	1×NAG; 1×09N; 1×NAG;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with C8PhF	3gmo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×C8F; 1×PLM; 4×EDO;
Download Compare Structure Assessment
Crystal structure of the alpha-galactosylceramide analog OCH in complex with mouse CD1d	3g08 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×FEE; 1×PLM;
Download Compare Structure Assessment
Structure of glycolipid aGSA[26,P5p] in complex with mouse CD1d	6c6f PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×ELS; 2×NA;
Download Compare Structure Assessment
Crystal structure of the mouse CD1d-Glc-DAG-s2 complex	3t1f PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.62	1×NAG; 2×NAG; 1×3TF; 5×GOL;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with PBS-25	3gmp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×PBS; 1×PLM; 4×EDO;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with C6Ph	3gml PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×C6Q; 1×PLM; 4×EDO;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with C10Ph	3gmn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×C1Q; 1×PLM; 4×EDO;
Download Compare Structure Assessment
Structure of mouse CD1d with bound alpha-galactosylsphingamide JG168	5tw2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×7LP; 1×PLM;
Download Compare Structure Assessment
Structure of glycolipid aGSA[8,P5p] in complex with mouse CD1d	6c6j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×PLM; 1×J76;
Download Compare Structure Assessment
Structure of mouse CD1d expressed in SF9 cells, no ligand added	3gmq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×PLM; 4×EDO;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with C8Ph	3gmm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×C8P; 1×PLM; 4×EDO;
Download Compare Structure Assessment
Structure of mouse CD1d with bound glycosphingolipid JJ112	5tw5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 1×PLM; 2×NAG; 1×7LM;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with C8Ph, different space group	3gmr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	2×NAG; 1×NAG; 1×C8P; 1×PLM; 4×EDO; 1×PG4;
Download Compare Structure Assessment
Structural basis of sulfatide presentation by mouse CD1d	2akr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	3×NAG; 1×CIS;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxm (JJ290) /iNKTCR ternary complex	6mjj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	25-297	99.63	1×NAG; 1×NAG; 10×GOL; 9×NA; 1×NAG; 1×JU4;
Download Compare Structure Assessment
Structure of glycolipid aGSA[12,6P] in complex with mouse CD1d	6c69 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 2×NAG; 1×ELM; 1×PLM;
Download Compare Structure Assessment
Structure of the endogenous iNKT cell ligand iGb3 bound to mCD1d	2q7y PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×IGC; 1×PLM;
Download Compare Structure Assessment
Structure of glycolipid aGSA[8,P5m] in complex with mouse CD1d	6c6h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×ELG; 1×PLM;
Download Compare Structure Assessment
Crystal structure of MCD1D/INKTCR TERNARY COMPLEX bound to glycolipid (XXW)	6mj4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	25-297	99.63	1×NAG; 1×NAG; 6×GOL; 1×NA; 1×NAG; 1×JTG;
Download Compare Structure Assessment
Structure of mCD1d with bound glycolipid BbGL-2c from Borrelia burgdorferi	3ilq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×1O2;
Download Compare Structure Assessment
Structure of alpha-GSA[26,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cxe PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 4×NA; 2×NAG; 1×EM4;
Download Compare Structure Assessment
Crystal structure of the mCD1d/xxq (JJ300)/iNKTCR ternary complex	6miv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	25-297	100.0	1×NAG; 1×NAG; 3×NA; 4×GOL; 1×NAG; 1×JU1;
Download Compare Structure Assessment
Structure of glycolipid aGSA[20,6P] in complex with mouse CD1d	6c6c PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×EMG; 2×NA;
Download Compare Structure Assessment
Structure of glycolipid aGSA[26,6P] in complex with mouse CD1d	6c6e PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 2×NAG; 1×EM4; 2×NA;
Download Compare Structure Assessment
Structure of alpha-GSA[8,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cwe PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×7LP; 1×PLM;
Download Compare Structure Assessment
Structure of mouse CD1d in complex with dioleoyl-phosphatidic acid	4mx7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100	1×NAG; 2×NAG; 1×MX7;
Download Compare Structure Assessment
Crystal structure of Cardiolipin bound to mouse CD1D	3ma7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×CD4; 1×PLM; 1×NAG;
Download Compare Structure Assessment
Structure of the mouse CD1d-NU-alpha-GalCer-iNKT TCR complex	3quz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×QUV;
Download Compare Structure Assessment
Structure of alpha-GSA[16,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cx9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 7×NA; 1×EM4;
Download Compare Structure Assessment
Structure of alpha-GSA[8,8P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cx5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×PLM; 1×FJM; 1×NA;
Download Compare Structure Assessment
Structure of glycolipid aGSA[16,6P] in complex with mouse CD1d	6c6a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 2×NAG; 1×EL7;
Download Compare Structure Assessment
Structure of glycolipid aGSA[8,9] in complex with mouse CD1d	6c5m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×J81; 1×PLM;
Download Compare Structure Assessment
Structure of 1B1 bound to mouse CD1d	6oor PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0G2JZW1; P01887;	25-297	99.27	4×NA; 3×UNL;
Download Compare Structure Assessment
Crystal structure of mouse CD1d in complex with ganglioside GD3	3au1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×BGC; 1×NAG; 1×ERA;
Download Compare Structure Assessment
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-isoglobotrihexosylce…	3scm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	25-297	99.63	1×NAG; 2×NAG; 1×LGN;
Download Compare Structure Assessment
Structure of alpha-GSA[26,P5p] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cxf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×ELS; 6×NA;
Download Compare Structure Assessment
Structure of alpha-GSA[12,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cx7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 5×NA; 1×PLM; 2×NAG; 1×ELM;
Download Compare Structure Assessment
Crystal structure of TCR-MHC-like molecule	6bnl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	24-296	100.0	1×NAG; 2×NAG; 1×QWV;
Download Compare Structure Assessment
Mycobacterial lipoglycan presentation by CD1d	2gaz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 2×NAG; 1×XPX;
Download Compare Structure Assessment
Structure of alpha-GSA[20,6P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cxa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×EMG; 4×NA;
Download Compare Structure Assessment
CD1(MOUSE) ANTIGEN PRESENTING MOLECULE	1cd1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63
Download Compare Structure Assessment
Structure of the mouse CD1d-Glc-DAG-s2-iNKT TCR complex	3ta3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A5B9; P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×3TF;
Download Compare Structure Assessment
Recognition of Glycolipid Antigen by iNKT Cell TCR	3o8x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A5B9; P01848; P01887;	25-297	100.0	1×NAG; 1×NAG; 1×GSL; 1×NAG;
Download Compare Structure Assessment
Crystal Structure of mouse CD1d bound to the self ligand phosphatidylcholine	1zhn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 1×NAG; 1×NAG; 1×PC6; 1×GOL;
Download Compare Structure Assessment
Ternary crystal structure of the mouse NKT TCR-CD1d-4'deoxy-alpha-galactosylceramide	3are PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01850; P01887;	25-297	99.63	2×NAG; 1×NAG; 1×4GH; 1×PEG;
Download Compare Structure Assessment
Structure of the mouse CD1d-HS44-iNKT TCR complex	3rtq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 1×NAG; 1×NAG; 1×H4S;
Download Compare Structure Assessment
Crystal structure of the mCD1d/DB06-1/iNKTCR ternary complex	4zak PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A0G2JG46; A0A5B9; A0N8J3; A2NTY6; K7N5M3; P01887;	25-297	100.0	1×NAG; 2×NAG; 1×4LX;
Download Compare Structure Assessment
Structure of alpha-GC[8,18] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cw6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer K7N5M3; K7N5M4; P01887;	25-297	100.0	1×NAG; 2×NAG; 1×PBS; 1×PLM;
Download Compare Structure Assessment
Structure of alpha-GSA[8,4P] bound by CD1d and in complex with the Va14Vb8.2 TCR	6cwb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×PLM; 1×FJJ; 1×NA;
Download Compare Structure Assessment
Ternary crystal structure of the mouse NKT TCR-CD1d-C20:2	3arf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01850; P01887;	25-297	99.63	3×NAG; 1×DB3;
Download Compare Structure Assessment
Structure of the mouse CD1d-alpha-C-GalCer-iNKT TCR complex	3qux PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A5B9; P01848; P01887;	25-297	100.0	1×NAG; 2×NAG; 1×QUX;
Download Compare Structure Assessment
Ternary crystal structure of the mouse NKT TCR-CD1d-alpha-glucosylceramide(C20:2)	3arg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01850; P01887;	25-297	99.63	2×NAG; 1×NAG; 1×DB6;
Download Compare Structure Assessment
Diversity in the type II Natural Killer T cell receptor repertoire and antigen specificity leads to…	6mss PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×SRV;
Download Compare Structure Assessment
Structure of the mouse CD1d-4ClPhC-alpha-GalCer-iNKT TCR complex	4irj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×1L9;
Download Compare Structure Assessment
Crystal structure of the mCD1d/GCK152/iNKTCR ternary complex	4y4h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A2NTY6; P01848; P01887;	25-297	100.0	2×NAG; 1×NAG; 1×49X;
Download Compare Structure Assessment
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-globotrihexosylceram…	3sdc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	25-297	99.63	1×NAG; 2×NAG; 1×3GB;
Download Compare Structure Assessment
Crystal Structure of XV19 TCR in complex with CD1d-sulfatide C24:1	4ei5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	99.63	1×NAG; 1×NAG; 1×NAG; 1×FLC; 1×CIS;
Download Compare Structure Assessment
Structure of alpha-galactosylphytosphingosine bound by CD1d and in complex with the Va14Vb8.2 TCR	5vcj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; K7N5M3; P01887;	25-297	100.0	1×NAG; 1×N57; 1×PLM; 2×NAG;
Download Compare Structure Assessment
Crystal structure of the mCD1d/GCK127/iNKTCR ternary complex	4y4f PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A2NTY6; P01848; P01887;	25-297	100.0	1×NAG; 1×NAG; 1×49M;
Download Compare Structure Assessment
Structure of mouse Va14Vb8.2NKT TCR-mouse CD1d-a-C-Galactosylceramide complex	3tn0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01850; P01887;	25-297	99.63	1×NAG; 1×QUX; 2×NAG;
Download Compare Structure Assessment
Crystal structure of the mouse CD1d-lysosulfatide-Hy19.3 TCR complex	4elm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	25-297	100.0	1×NAG; 2×NAG; 1×SGF; 1×PLM;
Download Compare Structure Assessment
Structure of a microbial glycosphingolipid bound to mouse CD1d	2fik PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	26-297	99.62	1×NAG; 2×NAG; 1×GSL; 1×PLM;
Download Compare Structure Assessment
Structure of mCD1d with bound glycolipid BbGL-2f from Borrelia burgdorferi	3ilp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	26-297	100.0	1×NAG; 1×NAG; 1×1L2; 1×DMS;
Download Compare Structure Assessment
Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D	1z5l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	26-297	100.0	1×NAG; 2×NAG; 1×PBS; 1×R16;
Download Compare Structure Assessment
Crystal structure of Valpha10-Vbeta8.1 NKT TCR in complex with CD1d-alphaglucosylceramide (C20:2)	3rug PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	26-297	100.0	1×NAG; 1×DB6; 2×NAG;
Download Compare Structure Assessment
Crystal structure of mouse CD1d-alpha-galactosylceramide with mouse Valpha14-Vbeta7 NKT TCR	3he7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01848; P01887;	26-297	99.62	1×NAG; 2×NAG; 1×AGH;
Download Compare Structure Assessment
Crystal structure of mouse CD1d-alpha-galactosylceramide with mouse Valpha14-Vbeta8.2 NKT TCR	3he6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01850; P01887;	26-297	99.62	1×NAG; 2×NAG; 1×AGH;
Download Compare Structure Assessment
Structure of mouse Valpha14Vbeta2-mouseCD1d-alpha-Galactosylceramide	3to4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	26-297	99.63	1×NAG; 1×AGH; 2×NAG;
Download Compare Structure Assessment
Crystal structure of TCR-MHC-like molecule	6bnk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887;	26-297	99.63	1×NAG; 2×NAG; 1×AGH;
Download Compare Structure Assessment
Crystal structure of the mCD1d/7DW8-5/iNKTCR ternary complex	4y2d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0B4J1J9; A0A5B9; A2NTY6; P01848; P01887;	24-293	100.0	3×NAG; 1×7DW;
Download Compare Structure Assessment
Structure of the mouse CD1d-SMC124-iNKT TCR complex	3tvm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A5B9; P01848; P01887;	25-267	100.0	1×NAG; 1×NAG; 1×NAG; 1×07P; 1×GOL;
Download Compare Structure Assessment
Structure of human CD1d-sulfatide	4mq7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887; P15813;	205-297	98.92	1×NAG; 1×CIS;
Download Compare Structure Assessment
Structure of the DP10.7 TCR with CD1d-sulfatide	4mng PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01887; P15813; Q6PJ56;	205-297	98.92	3×NAG; 1×CIS;
Download Compare Structure Assessment

1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	4mx7.1.A	monomer	0.85	25-297	1×NAG; 1×MX7;	100.00
	Download Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P11609 (CD1D1_MOUSE) Mus musculus (Mouse)

Antigen-presenting glycoprotein CD1d1 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

100 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Antigen-presenting glycoprotein CD1d1 UniProtKB InterPro STRING Interactive Modelling