SMTL ID : 1zhn.1

Crystal Structure of mouse CD1d bound to the self ligand phosphatidylcholine

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.80 Å
Oligo State
hetero-1-1-mer
Ligands
1 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- MAN- MAN- MAN- FUC: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x PC6: 7-[(DODECANOYLOXY)METHYL]-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-3,5,8-TRIOXA-4-PHOSPHADOTRIACONTAN-1-AMINIUM 4-OXIDE(Non-covalent)
1 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Giabbai, B. et al., Crystal structure of mouse CD1d bound to the self ligand phosphatidylcholine: a molecular basis for NKT cell activation. J.Immunol. (2005)
Release Date
2005-07-19
Peptides
CD1d1 antigen: A
beta-2-microglobulin: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

CD1d1 antigen

beta-2-microglobulin

Related Entries With Identical Sequence

1bqh.1 | 1bqh.2 | 1cd1.1 | 1cd1.2 | 1fo0.1 | 1fzj.1 | 1fzj.2 | 1fzk.1 | 1fzk.2 | 1fzm.1 | 1fzo.1 | 1g6r.1 | 1g6r.2 | 1g7p.1 | 1g7q.1 | 1hoc.1 | 1inq.1 | 1juf.1 | 1k8d.1 | 1kbg.1 | 1kj2.1 | 1kj2.2 | 1kj3.1 | 1kj3.2 | 1kpu.1 | 1kpv.1 | 1kpv.2 | 1ld9.1 | 1ld9.2 | 1ldp.1  more...