Q9CXW4 | SWISS-MODEL Repository

Q9CXW4 (RL11_MOUSE) Mus musculus (Mouse)

Large ribosomal subunit protein uL5 UniProtKB InterPro STRING Interactive Modelling

178 aa; Sequence (Fasta) ; 78 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

58 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
human MDM2-5S RNP	8bgu PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P46777; P62913; Q00987;	3-178	100	1×ZN;
Download Compare Structure Assessment
Cryo-EM structure of a pre-60S ribosomal subunit - state C	6lqm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q969S3; Q96D46; Q96L21; Q9Y3U8;	3-178	100	251×MG;
Download Compare Structure Assessment
Tetracenomycin X bound to the human ribosome	6y6x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62945; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9Y3U8;	3-178	100	229×MG; 1×OCW; 5×ZN;
Download Compare Structure Assessment
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	8oj5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	3-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	8oj8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P38377; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9Y3U8;	3-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	8ohd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	3-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
human delta-METTL18 60S ribosome	7f5s PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62945; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	3-177	100	279×MG; 5×ZN;
Download Compare Structure Assessment
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	8oj0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61619; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	3-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex	8b5l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9CHB7; A0A5F9DJN2; B7NZN9; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SV74; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TKB3; G1TL06; G1TPE6; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TU86; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1TYL6; G1U001; G1U7L1; P0DXC2; P19949; U3KPD5;	8-177	100	178×MG; 5×ZN;
Download Compare Structure Assessment
Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein…	6t59 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SMR7; G1SNY0; G1SQH0; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TL06; G1TT27; G1TTN1; G1TTQ5; G1TUB1; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U001; G1U7L1; P19949; Q8N0Z6; U3KPD5;	8-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the …	7tm3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A8C0RJF2; A0A8C0RUW0; A0A8C0S144; A0A8C0TSD6; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TJR3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TUB1; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U001; G1U7L1; P19949; P38377; P60467; U3KPD5;	8-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein…	8bpo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9C3C5; B7NZQ2; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SMR7; G1SNY0; G1SPK4; G1SQH0; G1STW0; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TKB3; G1TL06; G1TTN1; G1TTQ5; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U001; G1U7L1; P07437; P19949; Q8N0Z6; Q9BY12; U3KPD5;	8-177	100	214×MG; 5×ZN;
Download Compare Structure Assessment
Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the …	7tut PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A2K5PSA0; A0A8C0RJF2; A0A8C0RUW0; A0A8C0S144; A0A8C0TSD6; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TJR3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TUB1; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U001; G1U7L1; P19949; P38377; P60467; U3KPD5;	8-177	100	220×MG; 5×ZN;
Download Compare Structure Assessment
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	9gmo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q969S3; Q9Y3U8;	8-177	100	227×MG; 155×K; 2×NA; 1×GTP; 1×EPE; 5×ZN;
Download Compare Structure Assessment
UFL1 E3 ligase bound 60S ribosome	8qfd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	8-177	100	161×MG; 5×ZN;
Download Compare Structure Assessment
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147	8b6c PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9CHB7; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TKB3; G1TL06; G1TPE6; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1TYL6; G1U001; G1U7L1; P0DXC2; P19949; U3KPD5;	8-177	100	178×MG; 5×ZN; 1×OWI;
Download Compare Structure Assessment
Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec6…	8rjb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A8I3PRN4; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TJR3; G1TKB3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1U001; G1U7L1; P02699; P0DXC2; P19949; P38377; P60058; P60467; U3KPD5;	8-177	100	218×MG; 5×ZN;
Download Compare Structure Assessment
Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec6…	8rjc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A8C0T6I4; A0A8I3PRN4; A0A8I3PXW2; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TJR3; G1TKB3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1U001; G1U7L1; P02699; P0DXC2; P16967; P19949; P23438; P24643; P38377; P60058; P60467; U3KPD5;	8-177	100	218×MG; 5×ZN;
Download Compare Structure Assessment
Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec6…	8rjd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A8C0T6I4; A0A8I3PRN4; A0A8I3PXW2; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TDL2; G1TFE0; G1TKB3; G1TL06; G1TSG1; G1TT27; G1TTN1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TVS8; G1TXF6; G1TXG5; G1TYL6; G1U001; G1U7L1; P02699; P0DXC2; P16967; P19949; P23438; P24643; P38377; P60058; P60467; U3KPD5;	8-177	100	218×MG; 5×ZN;
Download Compare Structure Assessment
Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	8a3d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	8-177	100	229×MG; 155×K; 2×NA; 1×HMT; 1×SPM; 1×EPE; 5×ZN;
Download Compare Structure Assessment
EIF6-bound large subunit of the human ribosome	7ow7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P36578; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62899; P62910; P62913; P62917; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q6IPH7; Q96L21; Q9Y3U8;	8-177	100	223×MG; 5×ZN; 153×K; 4×NA; 1×BR;
Download Compare Structure Assessment
Mus musculus brain neocortex ribosome 60S bound to Ebp1	6swa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O09167; O55142; P12970; P14115; P14148; P19253; P27659; P35980; P41105; P47911; P47915; P47962; P47963; P47964; P50580; P51410; P62717; P62751; P62830; P62889; P62900; P62911; P62918; P62947; P67984; P84099; Q4FZH2; Q4VAF2; Q505A8; Q5BLJ9; Q5M9K3; Q5M9P1; Q6ZWV3; Q6ZWV7; Q8BP67; Q9CPR4; Q9CR57; Q9CZM2; Q9D1R9; Q9D823; Q9D8E6; Q9JJI8;	9-177	100	247×MG; 3×ZN;
Download Compare Structure Assessment
Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal me…	6ftg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; B7NZQ2; E2RQ08; F1PJP5; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SMR7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TG04; G1TL06; G1TT27; G1TTQ5; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U7L1; P19949; P38377; P60058; P60467; P86218; U3KPD5;	9-177	100	1×NAG; 159×MG; 5×ZN; 1×9UB;
Download Compare Structure Assessment
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A	7nfx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9D391; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T0C1; G1T6D1; G1TL06; G1TSG1; G1TUB8; G1TUN8; G1TX70; G1TXF6; G1TXG5; G1U7L1; O76094; P08240; P09132; P19949; P37108; P49458; P61011; P63048; Q3T0W9; Q9UHB9; Q9Y5M8; U3KPD5;	9-177	100	5×ZN; 2×MG; 1×GTP; 1×GNP;
Download Compare Structure Assessment
Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC	7qws PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9D391; A0A5F9D5B2; B7NZQ2; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T0C1; G1T6D1; G1TDL2; G1TKK2; G1TL06; G1TTQ5; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U7L1; P19949; Q13765; Q3T0W9; Q8N0Z6; U3KPD5;	9-177	100	5×ZN; 97×MG;
Download Compare Structure Assessment
Ternary complex of ribosome nascent chain with SRP and NAC	7qwq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A2U3YV30; A0A5F9D391; B5FYZ2; B7NZQ2; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T0C1; G1T6D1; G1TDL2; G1TL06; G1TT27; G1TTQ5; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U7L1; P09132; P19949; P20290; P61011; Q13765; Q3T0W9; Q9UHB9; U3KPD5;	9-177	100	97×MG; 5×ZN;
Download Compare Structure Assessment
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC	7qwr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9D391; A0A5F9D5B2; B7NZQ2; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T0C1; G1T6D1; G1TDL2; G1TKB3; G1TL06; G1TTQ5; G1TUB8; G1TUN8; G1TX70; G1TXF6; G1TXG5; G1U7L1; P19949; P20290; Q13765; Q3T0W9; U3KPD5;	9-177	100	5×ZN; 97×MG;
Download Compare Structure Assessment
Cryo-EM structure of the human ribosome-TMCO1 translocon	6w6l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer J3KQN4; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P60059; P60468; P61254; P61313; P61353; P61513; P61619; P61927; P62424; P62750; P62888; P62891; P62910; P62913; P62917; P62945; P63173; P83731; P84098; Q02543; Q02878; Q07020; Q969V3; Q96A33; Q9BVK8; Q9UM00; Q9Y3U8;	9-177	100	28×MG; 3×ZN;
Download Compare Structure Assessment
RNC-SRP early complex	7obr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; A0A5F9D391; A0A5F9D5B2; B7NZQ2; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SKF7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T0C1; G1T6D1; G1TDL2; G1TL06; G1TSG1; G1TTQ5; G1TTY7; G1TUB8; G1TUN8; G1TX70; G1TXF6; G1TXG5; G1U7L1; J9PAS6; P16255; P18962; P19949; P21262; P33731; P61010; P63048; Q00004; Q3T0W9; U3KPD5;	9-177	100	97×MG; 5×ZN; 1×GDP;
Download Compare Structure Assessment
Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S …	6fti PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; B7NZQ2; E2RQ08; F1PJP5; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SMR7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TG04; G1TL06; G1TT27; G1TTQ5; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U7L1; P19949; P38377; P60058; P60467; P86218; U3KPD5;	9-177	100	1×NAG; 159×MG; 5×ZN; 1×9UB;
Download Compare Structure Assessment
Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed …	6ftj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A087WNH4; B7NZQ2; E2RQ08; F1PJP5; G1SCJ6; G1SE28; G1SE76; G1SF08; G1SGR6; G1SHG0; G1SHQ2; G1SIT5; G1SMR7; G1SNY0; G1SQH0; G1STW0; G1SV32; G1SVW5; G1SWI6; G1SY53; G1SYU7; G1SZ12; G1T040; G1T0C1; G1T6D1; G1TG04; G1TL06; G1TSG1; G1TT27; G1TTQ5; G1TUB8; G1TUN8; G1TXF6; G1TXG5; G1U7L1; P19949; P38377; P60058; P60467; P86218; U3KPD5;	9-177	100	1×NAG; 159×MG; 5×ZN; 1×9UB;
Download Compare Structure Assessment
Human nucleolar pre-60S ribosomal subunit (State H)	8fl0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O95478; P18077; P18124; P30050; P32969; P36578; P39023; P40429; P46777; P46778; P46779; P50914; P56537; P62829; P62910; P62913; Q02543; Q02878; Q07020; Q13823; Q15050; Q9BRT6; Q9BVP2; Q9BZE4; Q9H6F5; Q9H7B2; Q9NVX2; Q9UHA3; Q9UKD2;	9-176	100	22×MG; 1×GTP; 2×K; 1×GDP; 1×ZN;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State L2)	8fle PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	9-176	100	87×MG; 6×ZN;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State K1)	8fla PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	9-176	100	88×MG; 6×ZN; 1×GDP; 1×K;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State J1)	8fl6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	9-176	100	88×MG; 6×ZN; 1×GDP; 1×K;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State L3)	8flf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9Y3U8;	9-176	100	87×MG; 6×ZN;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State K2)	8flb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	9-176	100	88×MG; 6×ZN; 1×GDP; 1×K;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State J2)	8fl7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	9-176	100	88×MG; 6×ZN; 1×GDP; 1×K;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State K3)	8flc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	9-176	100	88×MG; 6×ZN; 1×GDP; 1×K;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State L1)	8fld PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	9-176	100	87×MG; 6×ZN;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State I3)	8fl4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q8IZL8; Q9BRT6; Q9BV38; Q9BVP2; Q9BZE4; Q9H6F5; Q9NVU7; Q9NVX2; Q9NXF1; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8; Q9Y4W2;	9-176	100	99×MG; 5×ZN; 1×GTP; 2×K; 1×GDP;
Download Compare Structure Assessment
Human nuclear pre-60S ribosomal subunit (State J3)	8fl9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9Y3U8;	9-176	100	88×MG; 6×ZN; 1×GDP; 1×K;
Download Compare Structure Assessment
Cryo-EM structure of the human Ebp1 - 80S ribosome	7bhp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9UQ80; Q9Y3U8;	8-174	100.0	41×MG; 4×ZN;
Download Compare Structure Assessment
Crystal structure of human MDM2-RPL11	4xxb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P62913; Q00987;	13-178	100.0	1×IMD; 1×BME; 2×ZN;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State B	8ir3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q15050; Q6DKI1; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9H6F5; Q9H7B2; Q9NVX2; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100	1×GTP; 1×MG;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State F	8idy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9NVU7; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	14-178	100	1×GDP; 1×MG; 1×K;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State E	8ie3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State D	8ink PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q9BRT6; Q9BVP2; Q9BZE4; Q9H6F5; Q9NVU7; Q9NVX2; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100	1×GTP; 1×MG;
Download Compare Structure Assessment
Cryo-EM structure of a pre-60S ribosomal subunit - state preA	6lss PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9Y3U8;	14-178	100	250×MG;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State C	8ipx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9H6F5; Q9NVX2; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100	1×GTP; 1×MG;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State D	8ipy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9H6F5; Q9NVU7; Q9NVX2; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100	1×GTP; 1×MG;
Download Compare Structure Assessment
Cryo-EM structure of a human pre-60S ribosomal subunit - state A	6lu8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96D46; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9Y3U8;	14-178	100	247×MG;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State C	8ipd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q9BRT6; Q9BVP2; Q9BZE4; Q9H6F5; Q9NVX2; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100	1×GTP; 1×MG;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State G	8idt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	14-178	100	1×GDP; 2×MG; 1×K; 1×GTP;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State A	8ir1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q15050; Q8IY81; Q9BRT6; Q9BVP2; Q9BZE4; Q9H6F5; Q9H7B2; Q9NVX2; Q9UHA3; Q9UKD2; Q9Y3U8;	14-178	100	1×GTP; 1×MG;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State G	8ine PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	14-177	100	1×GDP; 1×MG; 1×K;
Download Compare Structure Assessment
human nuclear pre-60S ribosomal particle - State F	8inf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer E9PRG8; O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NVU7; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	14-177	100	1×GDP; 1×MG; 1×K;
Download Compare Structure Assessment
Cryo-EM structure of a pre-60S ribosomal subunit - state B	6lsr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q969S3; Q96D46; Q9H089; Q9UQ80; Q9Y3U8;	13-174	100	246×MG;
Download Compare Structure Assessment

1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6sgc.43.A	monomer	0.82	8-177		100.00
	Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Q9CXW4 (RL11_MOUSE) Mus musculus (Mouse)

Large ribosomal subunit protein uL5 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

58 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Large ribosomal subunit protein uL5 UniProtKB InterPro STRING Interactive Modelling