SMTL ID : 1fub.2 (1 other biounit)

FIRST PROTEIN STRUCTURE DETERMINED FROM X-RAY POWDER DIFFRACTION DATA

Coordinates

PDB Format Compare

Method

POWDER DIFFRACTION

Oligo State

hetero-6-6-mer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: CL.2, ZN.6, CL.7, ZN.11, CL.12 3 PLIP interactions: 1 interactions with chain J, 1 interactions with chain F, 1 interactions with chain B Metal complexes: J:H.10, F:H.10, B:H.10 ZN.4: 8 residues within 4Å: Chain D: H.10 Chain H: H.10 Chain L: H.10 Ligands: CL.5, ZN.9, CL.10, ZN.14, CL.15 3 PLIP interactions: 1 interactions with chain H, 1 interactions with chain D, 1 interactions with chain L Metal complexes: H:H.10, D:H.10, L:H.10 ZN.6: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.1, CL.2, CL.7, ZN.11, CL.12 3 PLIP interactions: 1 interactions with chain J, 1 interactions with chain F, 1 interactions with chain B Metal complexes: J:H.10, F:H.10, B:H.10 ZN.9: 8 residues within 4Å: Chain D: H.10 Chain H: H.10 Chain L: H.10 Ligands: ZN.4, CL.5, CL.10, ZN.14, CL.15 3 PLIP interactions: 1 interactions with chain H, 1 interactions with chain D, 1 interactions with chain L Metal complexes: H:H.10, D:H.10, L:H.10 ZN.11: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.1, CL.2, ZN.6, CL.7, CL.12 3 PLIP interactions: 1 interactions with chain J, 1 interactions with chain F, 1 interactions with chain B Metal complexes: J:H.10, F:H.10, B:H.10 ZN.14: 8 residues within 4Å: Chain D: H.10 Chain H: H.10 Chain L: H.10 Ligands: ZN.4, CL.5, ZN.9, CL.10, CL.15 3 PLIP interactions: 1 interactions with chain H, 1 interactions with chain D, 1 interactions with chain L Metal complexes: H:H.10, D:H.10, L:H.10

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.1, ZN.6, CL.7, ZN.11, CL.12 Ligand excluded by PLIP CL.5: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.4, ZN.9, CL.10, ZN.14, CL.15 Ligand excluded by PLIP CL.7: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.1, CL.2, ZN.6, ZN.11, CL.12 Ligand excluded by PLIP CL.10: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.4, CL.5, ZN.9, ZN.14, CL.15 Ligand excluded by PLIP CL.12: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.1, CL.2, ZN.6, CL.7, ZN.11 Ligand excluded by PLIP CL.15: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.4, CL.5, ZN.9, CL.10, ZN.14 Ligand excluded by PLIP

3 x NA: SODIUM ION(Non-functional Binders)

NA.3: 8 residues within 4Å: Chain B: S.9 Chain D: E.13 Chain F: S.9 Chain H: E.13 Chain J: S.9 Chain L: E.13 Ligands: NA.8, NA.13 4 PLIP interactions: 1 interactions with chain F, 1 interactions with chain J, 1 interactions with chain B, 1 interactions with chain D Hydrogen bonds: F:S.9, J:S.9, B:S.9, D:E.13 NA.8: 8 residues within 4Å: Chain B: S.9 Chain D: E.13 Chain F: S.9 Chain H: E.13 Chain J: S.9 Chain L: E.13 Ligands: NA.3, NA.13 4 PLIP interactions: 2 interactions with chain F, 1 interactions with chain J, 1 interactions with chain B Hydrogen bonds: F:S.9, F:S.9, J:S.9, B:S.9 NA.13: 8 residues within 4Å: Chain B: S.9 Chain D: E.13 Chain F: S.9 Chain H: E.13 Chain J: S.9 Chain L: E.13 Ligands: NA.3, NA.8 4 PLIP interactions: 1 interactions with chain L, 1 interactions with chain F, 1 interactions with chain J, 1 interactions with chain B Hydrogen bonds: L:E.13, F:S.9, J:S.9, B:S.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Von Dreele, R.B. et al., The first protein crystal structure determined from high-resolution X-ray powder diffraction data: a variant of T3R3 human insulin-zinc complex produced by grinding. Acta Crystallogr.,Sect.D (2000)

Release Date

2000-10-16

Peptides

INSULIN, A CHAIN: ACEGIK
INSULIN, B CHAIN: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
A

G
C

I
A

K
C

B
B

D
D

F
B

H
D

J
B

L
D

INSULIN, A CHAIN

INSULIN, B CHAIN

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