SMTL ID : 3inc.1

Crystal structure of human insulin with Ni+2 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-6-6-mer

Ligands

6 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 5 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: NI.3, NI.5 5 PLIP interactions: 1 interactions with chain B, 1 interactions with chain F, 1 interactions with chain J, 2 Ligand-Water interactions Metal complexes: B:H.10, F:H.10, J:H.10, H2O.1, H2O.3 NI.2: 5 residues within 4Å: Chain D: H.10 Chain H: H.10 Chain L: H.10 Ligands: NI.4, NI.6 6 PLIP interactions: 1 interactions with chain H, 1 interactions with chain L, 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: H:H.10, L:H.10, D:H.10, H2O.2, H2O.4, H2O.6 NI.3: 5 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: NI.1, NI.5 5 PLIP interactions: 1 interactions with chain B, 1 interactions with chain F, 1 interactions with chain J, 2 Ligand-Water interactions Metal complexes: B:H.10, F:H.10, J:H.10, H2O.1, H2O.3 NI.4: 5 residues within 4Å: Chain D: H.10 Chain H: H.10 Chain L: H.10 Ligands: NI.2, NI.6 6 PLIP interactions: 1 interactions with chain H, 1 interactions with chain L, 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: H:H.10, L:H.10, D:H.10, H2O.2, H2O.4, H2O.6 NI.5: 5 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: NI.1, NI.3 5 PLIP interactions: 1 interactions with chain B, 1 interactions with chain F, 1 interactions with chain J, 2 Ligand-Water interactions Metal complexes: B:H.10, F:H.10, J:H.10, H2O.1, H2O.3 NI.6: 5 residues within 4Å: Chain D: H.10 Chain H: H.10 Chain L: H.10 Ligands: NI.2, NI.4 6 PLIP interactions: 1 interactions with chain H, 1 interactions with chain L, 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: H:H.10, L:H.10, D:H.10, H2O.2, H2O.4, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Raghavendra, N. et al., Metal induced conformational changes in human insulin: Crystal structures of Sr+2, Ni+2 and Cu+2 complexes of human insulin. To be Published

Release Date

2010-08-18

Peptides

Insulin A chain: ACEGIK
Insulin B chain: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
A

G
C

I
A

K
C

B
B

D
D

F
B

H
D

J
B

L
D

Insulin A chain

Insulin B chain

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