SMTL ID : 1g7b.2 (1 other biounit)

1.3 A STRUCTURE OF T3R3 HUMAN INSULIN AT 100 K

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

hetero-6-6-mer

Ligands

9 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 7 residues within 4Å: Chain A: G.1, I.2, V.3, E.4 Chain B: P.28, K.29, T.30 Ligand excluded by PLIP CL.3: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.2, ZN.9, CL.10, ZN.16, CL.17 Ligand excluded by PLIP CL.7: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.6, ZN.13, CL.14, ZN.20, CL.21 Ligand excluded by PLIP CL.8: 7 residues within 4Å: Chain E: G.1, I.2, V.3, E.4 Chain F: P.28, K.29, T.30 Ligand excluded by PLIP CL.10: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.2, CL.3, ZN.9, ZN.16, CL.17 Ligand excluded by PLIP CL.14: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.6, CL.7, ZN.13, ZN.20, CL.21 Ligand excluded by PLIP CL.15: 7 residues within 4Å: Chain I: G.1, I.2, V.3, E.4 Chain J: P.28, K.29, T.30 Ligand excluded by PLIP CL.17: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.2, CL.3, ZN.9, CL.10, ZN.16 Ligand excluded by PLIP CL.21: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.6, CL.7, ZN.13, CL.14, ZN.20 Ligand excluded by PLIP

6 x ZN: ZINC ION(Non-covalent)

ZN.2: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: CL.3, ZN.9, CL.10, ZN.16, CL.17 5 PLIP interactions: 1 interactions with chain J, 1 interactions with chain B, 1 interactions with chain F, 2 Ligand-Water interactions Metal complexes: J:H.10, B:H.10, F:H.10, H2O.2, H2O.5 ZN.6: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: CL.7, ZN.13, CL.14, ZN.20, CL.21 3 PLIP interactions: 1 interactions with chain L, 1 interactions with chain D, 1 interactions with chain H Metal complexes: L:H.10, D:H.10, H:H.10 ZN.9: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.2, CL.3, CL.10, ZN.16, CL.17 5 PLIP interactions: 1 interactions with chain J, 1 interactions with chain B, 1 interactions with chain F, 2 Ligand-Water interactions Metal complexes: J:H.10, B:H.10, F:H.10, H2O.2, H2O.5 ZN.13: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.6, CL.7, CL.14, ZN.20, CL.21 3 PLIP interactions: 1 interactions with chain L, 1 interactions with chain D, 1 interactions with chain H Metal complexes: L:H.10, D:H.10, H:H.10 ZN.16: 8 residues within 4Å: Chain B: H.10 Chain F: H.10 Chain J: H.10 Ligands: ZN.2, CL.3, ZN.9, CL.10, CL.17 5 PLIP interactions: 1 interactions with chain J, 1 interactions with chain F, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: J:H.10, F:H.10, B:H.10, H2O.2, H2O.5 ZN.20: 11 residues within 4Å: Chain D: L.6, H.10 Chain H: L.6, H.10 Chain L: L.6, H.10 Ligands: ZN.6, CL.7, ZN.13, CL.14, CL.21 3 PLIP interactions: 1 interactions with chain H, 1 interactions with chain L, 1 interactions with chain D Metal complexes: H:H.10, L:H.10, D:H.10

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 12 residues within 4Å: Chain C: C.6, C.7, I.10, C.11, L.13, L.16 Chain D: C.7, H.10, L.11, A.14 Chain F: L.17 Chain H: L.6 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain D Hydrogen bonds: C:C.6, D:H.10 Water bridges: D:H.10 GOL.11: 12 residues within 4Å: Chain G: C.6, C.7, I.10, C.11, L.13, L.16 Chain H: C.7, H.10, L.11, A.14 Chain J: L.17 Chain L: L.6 3 PLIP interactions: 1 interactions with chain G, 2 interactions with chain H Hydrogen bonds: G:C.6, H:H.10 Water bridges: H:H.10 GOL.18: 12 residues within 4Å: Chain B: L.17 Chain D: L.6 Chain K: C.6, C.7, I.10, C.11, L.13, L.16 Chain L: C.7, H.10, L.11, A.14 3 PLIP interactions: 2 interactions with chain L, 1 interactions with chain K Hydrogen bonds: L:H.10, K:C.6 Water bridges: L:H.10

3 x ACN: ACETONE(Non-covalent)

ACN.5: 7 residues within 4Å: Chain C: L.13, Y.14, E.17 Chain D: V.18 Chain E: L.13 Chain F: F.1, V.18 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain E Hydrophobic interactions: C:Y.14, C:Y.14, E:L.13 ACN.12: 7 residues within 4Å: Chain G: L.13, Y.14, E.17 Chain H: V.18 Chain I: L.13 Chain J: F.1, V.18 3 PLIP interactions: 2 interactions with chain G, 1 interactions with chain I Hydrophobic interactions: G:Y.14, G:Y.14, I:L.13 ACN.19: 7 residues within 4Å: Chain A: L.13 Chain B: F.1, V.18 Chain K: L.13, Y.14, E.17 Chain L: V.18 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain K Hydrophobic interactions: A:L.13, K:Y.14, K:Y.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, G.D. et al., Phase changes in T(3)R(3)(f) human insulin: temperature or pressure induced?. Acta Crystallogr.,Sect.D (2001)

Release Date

2001-08-03

Peptides

INSULIN A-CHAIN: ACEGIK
INSULIN B-CHAIN: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
G

E
E

G
G

I
E

K
G

B
F

D
H

F
F

H
H

J
F

L
H

INSULIN A-CHAIN

INSULIN B-CHAIN

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