SMTL ID : 1hri.2 (3 other biounits)

STRUCTURE DETERMINATION OF ANTIVIRAL COMPOUND SCH 38057 COMPLEXED WITH HUMAN RHINOVIRUS 14

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-5-5-5-5-mer

Ligands

5 x S57: 1-[6-(2-CHLORO-4-METHYXYPHENOXY)-HEXYL]-IMIDAZOLE(Non-covalent)

S57.1: 15 residues within 4Å: Chain A: N.105, L.106, Y.128, A.150, Y.152, P.174, V.176, F.186, V.188, V.191, Y.197, N.219, M.221 Chain C: A.24, L.25 7 PLIP interactions: 2 interactions with chain C, 5 interactions with chain A Hydrophobic interactions: C:A.24, C:L.25, A:Y.152, A:Y.152, A:P.174, A:F.186, A:V.191 S57.2: 15 residues within 4Å: Chain E: N.105, L.106, Y.128, A.150, Y.152, P.174, V.176, F.186, V.188, V.191, Y.197, N.219, M.221 Chain G: A.24, L.25 7 PLIP interactions: 5 interactions with chain E, 2 interactions with chain G Hydrophobic interactions: E:Y.152, E:Y.152, E:P.174, E:F.186, E:V.191, G:A.24, G:L.25 S57.3: 15 residues within 4Å: Chain I: N.105, L.106, Y.128, A.150, Y.152, P.174, V.176, F.186, V.188, V.191, Y.197, N.219, M.221 Chain K: A.24, L.25 7 PLIP interactions: 2 interactions with chain K, 5 interactions with chain I Hydrophobic interactions: K:A.24, K:L.25, I:Y.152, I:Y.152, I:P.174, I:F.186, I:V.191 S57.4: 15 residues within 4Å: Chain M: N.105, L.106, Y.128, A.150, Y.152, P.174, V.176, F.186, V.188, V.191, Y.197, N.219, M.221 Chain O: A.24, L.25 7 PLIP interactions: 2 interactions with chain O, 5 interactions with chain M Hydrophobic interactions: O:A.24, O:L.25, M:Y.152, M:Y.152, M:P.174, M:F.186, M:V.191 S57.5: 15 residues within 4Å: Chain Q: N.105, L.106, Y.128, A.150, Y.152, P.174, V.176, F.186, V.188, V.191, Y.197, N.219, M.221 Chain S: A.24, L.25 7 PLIP interactions: 2 interactions with chain S, 5 interactions with chain Q Hydrophobic interactions: S:A.24, S:L.25, Q:Y.152, Q:Y.152, Q:P.174, Q:F.186, Q:V.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, A. et al., Structure determination of antiviral compound SCH 38057 complexed with human rhinovirus 14. J.Mol.Biol. (1993)

Release Date

1993-10-31

Peptides

HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1): AEIMQ
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2): BFJNR
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3): CGKOS
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4): DHLPT

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

B
2

F
2

J
2

N
2

R
2

C
3

G
3

K
3

O
3

S
3

D
4

H
4

L
4

P
4

T
4

HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1)

HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2)

HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3)

HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4)

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