SMTL ID : 1ncq.4 (3 other biounits)

The structure of HRV14 when complexed with pleconaril, an antiviral compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x W11: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE(Non-covalent)

W11.1: 18 residues within 4Å: Chain A: I.104, L.106, Y.128, A.150, M.151, Y.152, P.174, S.175, V.176, F.186, V.188, V.191, Y.197, N.219, M.221, M.224 Chain C: A.24, L.25 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:I.104, A:I.104, A:L.106, A:Y.128, A:Y.152, A:V.188, A:V.188, A:V.191, A:Y.197, C:L.25 Water bridges: A:N.219 pi-Stacking: A:Y.152 Halogen bonds: A:P.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds. J.Virol. (2004)

Release Date

2003-12-16

Peptides

COAT PROTEIN VP1: A
COAT PROTEIN VP2: B
COAT PROTEIN VP3: C
COAT PROTEIN VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

COAT PROTEIN VP1

COAT PROTEIN VP2

COAT PROTEIN VP3

COAT PROTEIN VP4

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