SMTL ID : 1ym2.2 (2 other biounits)

Crystal structure of human beta secretase complexed with NVP-AUR200

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ACE- LEU- MET- 24O- VAL- LYT: NVP-AUR200 INHIBITOR(Non-covalent)

ACE-LEU-MET-24O-VAL-LYT.1: 23 residues within 4Å: Chain A: G.27, Q.28, G.29, L.46, D.48, G.50, S.51, V.85, P.86, Y.87, T.88, Q.89, F.124, I.126, I.142, Y.214, I.242, D.244, G.246, T.247, T.248, R.251, V.348 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:L.46, A:L.46, A:V.85, A:Y.87, A:T.88, A:Q.89, A:F.124, A:I.126, A:I.142, A:Y.214 Hydrogen bonds: A:D.48, A:G.50, A:P.86, A:T.88, A:T.88, A:Q.89, A:Q.89, A:G.246, A:T.247, A:T.248, A:T.248, A:T.248 Water bridges: A:R.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hanessian, S. et al., Structure-based design, synthesis, and memapsin 2 (BACE) inhibitory activity of carbocyclic and heterocyclic peptidomimetics. J.Med.Chem. (2005)

Release Date

2006-01-17

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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