SMTL ID : 4d88.1

Crystal Structure of Human Beta Secretase in Complex with NVP-BXQ490

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x BXQ: (3S,4S,5R)-3-{4-amino-3-fluoro-5-[(2S)-3,3,3-trifluoro-2-hydroxypropyl]benzyl}-5-[(3-tert-butylbenzyl)amino]tetrahydro-2H-thiopyran-4-ol 1,1-dioxide(Non-covalent)

BXQ.1: 26 residues within 4Å: Chain A: S.26, G.27, Q.28, G.29, L.46, D.48, G.50, S.51, V.85, P.86, Y.87, T.88, Q.89, G.90, K.123, F.124, I.126, W.131, I.134, I.142, R.144, Y.214, D.244, G.246, T.247, T.248 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.85, A:Y.87, A:Y.87, A:F.124, A:I.126, A:W.131, A:I.134, A:I.142, A:Y.214 Hydrogen bonds: A:D.48, A:K.123, A:D.244 Water bridges: A:T.248 pi-Stacking: A:Y.87 Halogen bonds: A:K.123, A:T.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rueeger, H. et al., Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides. J.Med.Chem. (2012)

Release Date

2012-11-21

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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