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SMTL ID : 2fou.1

Human Carbonic Anhydrase II complexed with two-prong inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.99 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: B22.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x CU: COPPER (II) ION(Non-covalent)

CU.2:

2 residues within 4Å:

Chain A: S.2, H.3

2 PLIP interactions:

2 interactions with chain A

Metal complexes: A:S.2, A:H.3

2 x B22: [2,2'-{[2-({3-[({2-[4-(AMINOSULFONYL)PHENYL]ETHYL}AMINO)CARBONYL]PHENYL}AMINO)-2-OXOETHYL]IMINO}DIACETATO(2-)-KAPPAO]COPPER(Non-covalent)(Covalent)

B22.3:	15 residues within 4Å: Chain A: H.94, H.96, H.119, V.121, F.130, G.131, V.134, V.142, L.197, T.198, T.199, P.201, W.208 Ligands: ZN.1, GOL.5 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.121, A:F.130, A:F.130, A:V.134, A:L.197 Hydrogen bonds: A:T.198, A:T.198
B22.4:	9 residues within 4Å: Chain A: H.3, H.4, W.5, H.10, N.11, H.15, W.16, D.19, F.20 11 PLIP interactions: 10 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:H.4, A:N.11 Hydrogen bonds: A:D.19, A:D.19, A:D.19 Water bridges: A:H.10 Salt bridges: A:H.4, A:H.4 pi-Stacking: A:H.4 Metal complexes: A:H.4, B22.4

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5:

8 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, T.199
Ligands: B22.3

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
Water bridges: A:N.67, A:T.199

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Jude, K.M. et al., Ultrahigh resolution crystal structures of human carbonic anhydrases I and II complexed with two-prong inhibitors reveal the molecular basis of high affinity. J.Am.Chem.Soc. (2006)

Release Date

2006-04-04

Peptides

Carbonic Anhydrase II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic Anhydrase II

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