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SMTL ID : 2vva.1

Human carbonic anhydrase in complex with CO2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1:

4 residues within 4Å:

Chain A: N.62, H.64, N.67, Q.92

5 PLIP interactions:

5 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
Salt bridges: A:H.64

2 x CO2: CARBON DIOXIDE(Non-covalent)

CO2.2:	6 residues within 4Å: Chain A: F.95, W.97, A.116, L.147, V.222, F.225 No protein-ligand interaction detected (PLIP)
CO2.3:	9 residues within 4Å: Chain A: H.94, H.119, V.121, V.142, S.196, L.197, T.198, W.208 Ligands: ZN.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.198 Water bridges: A:Q.92

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4:	4 residues within 4Å: Chain A: K.112, Y.114, K.148, P.214 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.112, A:K.112, A:Y.114, A:Y.114
GOL.5:	3 residues within 4Å: Chain A: S.187, L.188, D.189 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.188, A:D.189

1 x ZN: ZINC ION(Non-covalent)

ZN.6:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: CO2.3

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Metal complexes: A:H.94, A:H.96, A:H.119, H₂O.14

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Sjoblom, B. et al., Structural Study of X-Ray Induced Activation of Carbonic Anhydrase. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-07-14

Peptides

CARBONIC ANHYDRASE 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

CARBONIC ANHYDRASE 2

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