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SMTL ID : 3d8w.1

Use of a carbonic Anhydrase II, IX Active-site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

5 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119
Ligands: D8W.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x D8W: 5-[(phenylsulfonyl)amino]-1,3,4-thiadiazole-2-sulfonamide(Non-covalent)

D8W.2:

13 residues within 4Å:

Chain A: Q.92, H.94, H.96, E.106, H.119, V.121, F.130, V.142, L.197, T.198, T.199, W.208
Ligands: ZN.1

9 PLIP interactions:

9 interactions with chain A

Hydrophobic interactions: A:L.197
Hydrogen bonds: A:Q.92, A:T.198, A:T.198, A:T.199
Water bridges: A:N.67, A:N.67
pi-Stacking: A:H.94, A:F.130

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Genis, C. et al., Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties. Biochemistry (2009)

Release Date

2009-03-03

Peptides

Carbonic anhydrase II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase II

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