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SMTL ID : 3ffp.1

X ray structure of the complex between carbonic anhydrase II and LC inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: LC1.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x HG: MERCURY (II) ION(Non-covalent)

HG.2:

6 residues within 4Å:

Chain A: V.134, Q.136, P.137, E.204, C.205
Ligands: BEZ.4

2 PLIP interactions:

2 interactions with chain A

Metal complexes: A:Q.136, A:E.204

1 x LC1: 2-(1,3-thiazol-4-yl)-1H-benzimidazole-5-sulfonamide(Non-covalent)

LC1.3:

14 residues within 4Å:

Chain A: I.91, Q.92, H.94, H.96, H.119, V.121, F.130, V.142, S.196, L.197, T.198, T.199, W.208
Ligands: ZN.1

4 PLIP interactions:

4 interactions with chain A

Hydrophobic interactions: A:V.121
Hydrogen bonds: A:T.198, A:T.198
pi-Stacking: A:F.130

1 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.4:

5 residues within 4Å:

Chain A: Q.135, Q.136, P.137, E.204
Ligands: HG.2

1 PLIP interactions:

1 interactions with chain A

Hydrophobic interactions: A:P.137

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Crocetti, L. et al., A thiabendazole sulfonamide shows potent inhibitory activity against mammalian and nematode alpha-carbonic anhydrases. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-08-18

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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