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SMTL ID : 3hkq.1

Human carbonic anhydrase II in complex with 1-S-D-Galactopyranosylsulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: 1SD.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x 1SD: (1S)-1,5-anhydro-1-sulfamoyl-D-galactitol(Non-covalent)

1SD.2:

11 residues within 4Å:

Chain A: N.67, Q.92, H.94, H.96, H.119, V.121, F.130, L.197, T.198, T.199
Ligands: ZN.1

5 PLIP interactions:

5 interactions with chain A

Hydrogen bonds: A:Q.92, A:T.198, A:T.198, A:T.199
Water bridges: A:N.67

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3:

5 residues within 4Å:

Chain A: Y.7, P.13, D.242, W.244, P.246

1 PLIP interactions:

1 interactions with chain A

Hydrogen bonds: A:Y.7

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Lopez, M. et al., S-glycosyl primary sulfonamides--a new structural class for selective inhibition of cancer-associated carbonic anhydrases. J.Med.Chem. (2009)

Release Date

2009-10-13

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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