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SMTL ID : 3k2f.1

Nitric oxide-donating carbonic anhydrase inhibitors for the treatment of open-angle glaucoma

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: NKX.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x HG: MERCURY (II) ION(Non-covalent)

HG.2:

5 residues within 4Å:

Chain A: V.134, Q.135, Q.136, E.204, C.205

No protein-ligand interaction detected (PLIP)

1 x NKX: (2S)-2,3-bis(nitrooxy)propyl ethyl[(4S,6S)-6-methyl-7,7-dioxido-2-sulfamoyl-5,6-dihydro-4H-thieno[2,3-b]thiopyran-4-yl]carbamate(Non-covalent)

NKX.3:

19 residues within 4Å:

Chain A: W.5, N.62, H.64, N.67, Q.92, H.94, H.96, H.119, V.121, F.130, L.140, V.142, S.196, L.197, T.198, T.199, P.200, W.208
Ligands: ZN.1

7 PLIP interactions:

7 interactions with chain A

Hydrophobic interactions: A:L.197
Hydrogen bonds: A:N.62, A:N.67, A:T.198, A:T.198, A:T.199
pi-Stacking: A:H.94

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Steele, R.M. et al., Nitric oxide-donating carbonic anhydrase inhibitors for the treatment of open-angle glaucoma. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-11-17

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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