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SMTL ID : 3mhm.1

Crystal structure of human carbonic anhydrase isozyme II with 4-{[N-(6-benzylamino-5-nitropyrimidin-4-yl)amino]methyl}benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: J75.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2:

5 residues within 4Å:

Chain A: Y.7, P.13, D.242, W.244, P.246

3 PLIP interactions:

3 interactions with chain A

Salt bridges: A:D.242
pi-Cation interactions: A:W.244, A:W.244

1 x J75: 4-({[6-(benzylamino)-5-nitropyrimidin-4-yl]amino}methyl)benzenesulfonamide(Non-covalent)

J75.3:

15 residues within 4Å:

Chain A: I.91, Q.92, H.94, H.96, H.119, V.121, D.129, F.130, G.131, V.142, L.197, T.198, T.199, W.208
Ligands: ZN.1

8 PLIP interactions:

8 interactions with chain A

Hydrophobic interactions: A:I.91, A:V.121, A:D.129, A:F.130, A:F.130, A:L.197
Hydrogen bonds: A:T.198, A:T.198

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Sudzius, J. et al., 4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII. Bioorg.Med.Chem. (2010)

Release Date

2010-10-20

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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