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SMTL ID : 3myq.1

Crystal structure of human carbonic anhydrase isozyme II with 2-chloro-5-[(1H-imidazo[4,5-c]quinolin-2-ylsulfanyl)acetyl]benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: E27.5

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2:

9 residues within 4Å:

Chain A: V.160, D.161, V.162, L.163, D.164, K.167, K.224, K.227, L.228

3 PLIP interactions:

3 interactions with chain A

Hydrogen bonds: A:L.163, A:D.164, A:D.164

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3:	5 residues within 4Å: Chain A: Y.7, P.13, D.242, W.244, P.246 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.242 pi-Cation interactions: A:W.244, A:W.244
DMS.4:	5 residues within 4Å: Chain A: N.67, I.91, Q.92, F.130 Ligands: E27.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.92 Water bridges: A:N.67

1 x E27: 2-chloro-5-[(1H-imidazo[4,5-c]quinolin-2-ylsulfanyl)acetyl]benzenesulfonamide(Non-covalent)

E27.5:

17 residues within 4Å:

Chain A: N.62, N.67, Q.92, H.94, H.96, H.119, V.121, F.130, L.140, V.142, L.197, T.198, T.199, P.201, W.208
Ligands: ZN.1, DMS.4

7 PLIP interactions:

7 interactions with chain A

Hydrophobic interactions: A:F.130, A:L.197, A:P.201
Hydrogen bonds: A:T.198, A:T.198, A:T.199
Water bridges: A:N.62

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Baranauskiene, L. et al., Indapamide-like benzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, and XIII. Bioorg.Med.Chem. (2010)

Release Date

2011-02-02

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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