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SMTL ID : 3v5g.1

Crystal structure of human carbonic anhydrase II in complex with the 4-sulfamido-benzenesulfonamide inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: 0F3.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x MBO: MERCURIBENZOIC ACID(Non-covalent)

MBO.2:

5 residues within 4Å:

Chain A: Q.135, Q.136, P.137, E.204, C.205

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Hydrophobic interactions: A:P.137
Metal complexes: A:Q.136, A:C.205, H₂O.15

3 x 0F3: 4-(sulfamoylamino)benzenesulfonamide(Non-covalent)

0F3.3:	13 residues within 4Å: Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, V.142, L.197, T.198, T.199, P.201, W.208 Ligands: ZN.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.121, A:L.197, A:L.197 Hydrogen bonds: A:T.198, A:T.198 Water bridges: A:Q.92, A:T.199, A:T.199, A:T.199
0F3.4:	8 residues within 4Å: Chain A: H.4, W.5, H.10, N.11, H.15, W.16, D.19, F.20 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.4 Hydrogen bonds: A:W.16, A:D.19 Water bridges: A:W.5, A:W.5
0F3.5:	5 residues within 4Å: Chain A: E.69, F.70, D.71, D.72, I.91 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:E.69, A:I.91, A:I.91 Hydrogen bonds: A:F.70, A:D.71, A:D.72, A:D.72 Water bridges: A:E.69, A:Q.92

1 x HGB: 4-(HYDROXYMERCURY)BENZOIC ACID(Non-covalent)

HGB.6:

6 residues within 4Å:

Chain A: G.6, Y.7, G.8, N.11, F.230, E.238

4 PLIP interactions:

4 interactions with chain A

Hydrophobic interactions: A:F.230
Hydrogen bonds: A:Y.7, A:G.8, A:N.11

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

D'Ambrosio, K. et al., Development of potent carbonic anhydrase inhibitors incorporating both sulfonamide and sulfamide groups. J.Med.Chem. (2012)

Release Date

2012-07-25

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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