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SMTL ID : 4e3h.1

Nucleophile recognition as an alternative inhibition mode for benzoic acid based carbonic anhydrase inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: HQE.3

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Metal complexes: A:H.94, A:H.96, A:H.119, H₂O.1

1 x MBO: MERCURIBENZOIC ACID(Non-covalent)

MBO.2:

6 residues within 4Å:

Chain A: V.134, Q.135, Q.136, P.137, E.204, C.205

1 PLIP interactions:

1 interactions with chain A

Metal complexes: A:C.205

1 x HQE: benzene-1,4-diol(Non-covalent)

HQE.3:

9 residues within 4Å:

Chain A: V.121, F.130, L.140, V.142, L.197, T.198, V.206, W.208
Ligands: ZN.1

7 PLIP interactions:

7 interactions with chain A

Hydrophobic interactions: A:V.121, A:L.140, A:V.142, A:L.197, A:L.197, A:V.206
Hydrogen bonds: A:T.198

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Martin, D.P. et al., Nucleophile recognition as an alternative inhibition mode for benzoic acid based carbonic anhydrase inhibitors. Chem.Commun.(Camb.) (2012)

Release Date

2012-06-27

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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