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SMTL ID : 4fpt.1

Carbonic Anhydrase II in complex with ethyl (2Z,4R)-2-(sulfamoylimino)-1,3-thiazolidine-4-carboxylate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.98 Å

Oligo State

monomer

Ligands

1 x MBO: MERCURIBENZOIC ACID(Non-covalent)

MBO.1:

5 residues within 4Å:

Chain A: Q.135, Q.136, P.137, E.204, C.205

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Hydrophobic interactions: A:P.137
Metal complexes: A:Q.136, A:C.205, H₂O.8

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: 0VZ.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x 0VZ: ethyl (2Z,4R)-2-(sulfamoylimino)-1,3-thiazolidine-4-carboxylate(Non-covalent)

0VZ.3:

14 residues within 4Å:

Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, L.197, T.198, T.199, P.200, P.201, W.208
Ligands: ZN.2, GOL.4

5 PLIP interactions:

5 interactions with chain A

Hydrophobic interactions: A:L.197
Hydrogen bonds: A:T.198, A:T.198, A:T.199, A:T.199

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4:

9 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: 0VZ.3

7 PLIP interactions:

7 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
Water bridges: A:Y.7, A:Y.7, A:N.67

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.5:	4 residues within 4Å: Chain A: Y.7, D.242, W.244, P.246 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.242 pi-Cation interactions: A:W.244, A:W.244
DMS.6:	3 residues within 4Å: Chain A: P.83, L.84, T.207 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.85, A:T.207

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Di Pizio, A. et al., High resolution crystal structures of Carbonic Anhydrase II in complex with novel sulfamide binders. To be Published

Release Date

2013-07-03

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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