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SMTL ID : 4fvn.1

Carbonic Anhydrase II in complex with N-(tetrahydropyrimidin-2(1H)-ylidene)sulfuric diamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x MBO: MERCURIBENZOIC ACID(Non-covalent)

MBO.1:

5 residues within 4Å:

Chain A: Q.135, Q.136, P.137, E.204, C.205

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Hydrophobic interactions: A:P.137
Metal complexes: A:Q.136, A:C.205, H₂O.12

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: 0VW.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x 0VW: N-(tetrahydropyrimidin-2(1H)-ylidene)sulfuric diamide(Non-covalent)

0VW.3:

11 residues within 4Å:

Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, L.197, T.198, T.199, W.208
Ligands: ZN.2

8 PLIP interactions:

8 interactions with chain A

Hydrophobic interactions: A:F.130
Hydrogen bonds: A:T.198, A:T.198, A:T.199, A:T.199
Water bridges: A:Q.92, A:T.199, A:T.199

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4:	4 residues within 4Å: Chain A: P.83, D.85, D.138, T.207 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:D.85
DMS.5:	3 residues within 4Å: Chain A: Y.7, D.242, W.244 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.242 pi-Cation interactions: A:W.244, A:W.244

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Di Pizio, A. et al., HIgh resolution crystal structures of Carbonic Anhydrase II in complex with novel sulfamide binders. To be Published

Release Date

2013-07-17

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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