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SMTL ID : 4qtl.1

Crystal structure of human carbonic anhydrase isozyme II with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: WWO.4

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2:

3 residues within 4Å:

Chain A: Y.7, D.242, W.244

3 PLIP interactions:

3 interactions with chain A

Salt bridges: A:D.242
pi-Cation interactions: A:W.244, A:W.244

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3:

4 residues within 4Å:

Chain A: L.163, D.164, K.224, K.227

1 PLIP interactions:

1 interactions with chain A

Salt bridges: A:D.164

1 x WWO: 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide(Non-covalent)

WWO.4:

17 residues within 4Å:

Chain A: N.62, N.67, I.91, Q.92, H.94, H.96, H.119, V.121, F.130, L.140, V.142, S.196, L.197, T.198, T.199, W.208
Ligands: ZN.1

8 PLIP interactions:

8 interactions with chain A

Hydrophobic interactions: A:N.62
Hydrogen bonds: A:Q.92, A:T.198, A:T.198, A:T.199, A:T.199
Water bridges: A:N.62, A:N.67

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Dudutiene, V. et al., Functionalization of Fluorinated Benzenesulfonamides and Their Inhibitory Properties toward Carbonic Anhydrases. Chemmedchem (2015)

Release Date

2015-04-15

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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