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SMTL ID : 4rh2.1

Crystal structure of human carbonic anhydrase II in complex with 2-(6-hydroxy-3-Oxo-3H-xanthen-9-yl)-5-{3-1-(4-sulfamoyl-phenyl)-1h-[1,2,3]triazol-4-ylmethyl-thioureido}-benzoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

7 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: FC9.2, GOL.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x FC9: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[({[1-(4-sulfamoylphenyl)-1H-1,2,3-triazol-4-yl]methyl}carbamothioyl)amino]benzoic acid(Non-covalent)

FC9.2:

18 residues within 4Å:

Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, G.131, V.134, Q.135, V.142, L.197, T.198, T.199, P.201, L.203, W.208
Ligands: ZN.1, GOL.3

11 PLIP interactions:

11 interactions with chain A

Hydrophobic interactions: A:V.121, A:V.134, A:Q.135, A:L.197, A:L.197, A:L.203, A:L.203
Hydrogen bonds: A:Q.92, A:T.198, A:T.198
Water bridges: A:N.67

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3:

9 residues within 4Å:

Chain A: N.62, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: ZN.1, FC9.2

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92, A:T.199, A:T.199

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Ferraroni, M. et al., New classes of carbonic anhydrase inhibitors. to be published

Release Date

2015-11-11

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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