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SMTL ID : 4ww6.1

Crystal structure of human carbonic anhydrase isozyme II with 2,3,5,6-Tetrafluoro-4-(propylthio)benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.06 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: 3TV.6

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2:

5 residues within 4Å:

Chain A: Y.7, P.13, D.242, W.244, P.246

3 PLIP interactions:

3 interactions with chain A

Salt bridges: A:D.242
pi-Cation interactions: A:W.244, A:W.244

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3:

6 residues within 4Å:

Chain A: L.163, D.164, K.167, K.224, K.227, L.228

1 PLIP interactions:

1 interactions with chain A

Hydrophobic interactions: A:K.224

1 x MLA: MALONIC ACID(Non-covalent)

MLA.4:

6 residues within 4Å:

Chain A: G.6, Y.7, G.8, N.11, F.230, E.238

5 PLIP interactions:

5 interactions with chain A

Hydrophobic interactions: A:F.230
Hydrogen bonds: A:Y.7, A:G.8, A:N.11, A:N.11

1 x BCN: BICINE(Non-covalent)

BCN.5:

4 residues within 4Å:

Chain A: K.148, K.212, E.213, P.214

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:K.212, A:K.212
Water bridges: A:Y.114
Salt bridges: A:K.148

2 x 3TV: 2,3,5,6-tetrafluoro-4-(propylsulfanyl)benzenesulfonamide(Non-covalent)

3TV.6:	13 residues within 4Å: Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, L.140, V.142, L.197, T.198, T.199, W.208 Ligands: ZN.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.197 Hydrogen bonds: A:T.198, A:T.198
3TV.7:	9 residues within 4Å: Chain A: H.4, W.5, H.10, N.11, H.15, W.16, K.18, D.19, F.20 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.10 Hydrogen bonds: A:W.16, A:D.19, A:D.19 Water bridges: A:W.5

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Zubriene, A. et al., Intrinsic thermodynamics of 4-substituted-2,3,5,6-tetrafluorobenzenesulfonamide binding to carbonic anhydrases by isothermal titration calorimetry. Biophys.Chem. (2015)

Release Date

2015-07-01

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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