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SMTL ID : 5ehe.1

Crystal structure of human carbonic anhydrase isozyme II with 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: WWO.6

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2:	4 residues within 4Å: Chain A: Y.7, D.242, W.244, P.246 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.242 pi-Cation interactions: A:W.244, A:W.244
DMS.5:	5 residues within 4Å: Chain A: K.153, P.185, P.214, I.215, S.216 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.153 Salt bridges: A:E.213

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3:

6 residues within 4Å:

Chain A: L.163, D.164, K.167, K.224, K.227, L.228

1 PLIP interactions:

1 interactions with chain A

Hydrophobic interactions: A:K.224

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4:

8 residues within 4Å:

Chain A: P.13, E.14, H.15, W.16, H.17, A.23, K.24, Q.248

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:P.13, A:H.17, A:K.24, A:Q.248
Water bridges: A:R.245, A:R.245

1 x WWO: 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide(Non-covalent)

WWO.6:

16 residues within 4Å:

Chain A: N.67, I.91, Q.92, H.94, H.96, H.119, V.121, F.130, V.142, L.197, T.198, T.199, P.200, P.201, W.208
Ligands: ZN.1

6 PLIP interactions:

6 interactions with chain A

Hydrophobic interactions: A:I.91, A:Q.92
Hydrogen bonds: A:Q.92, A:T.198, A:T.198
Halogen bonds: A:P.200

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Zubriene, A. et al., Intrinsic Thermodynamics and Structures of 2,4- and 3,4-Substituted Fluorinated Benzenesulfonamides Binding to Carbonic Anhydrases. ChemMedChem (2017)

Release Date

2016-11-09

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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