SMTL ID : 5ei4.1

First domain of human bromodomain BRD4 in complex with inhibitor 8-(5-Amino-1H-[1,2,4]triazol-3-ylsulfanylmethyl)-3-(4-chlorobenzyl)-7-ethyl-3,7-dihydropurine-2,6-dione

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62

1 x 5NV: 8-[(3-azanyl-1~{H}-1,2,4-triazol-5-yl)sulfanylmethyl]-3-[(4-chlorophenyl)methyl]-7-ethyl-purine-2,6-dione(Non-covalent)

5NV.2: 13 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, P.45, V.46, D.47, L.51, Y.56, Y.98, N.99, I.105, M.108 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.40, A:F.42, A:I.105, A:I.105 Hydrogen bonds: A:Q.44, A:P.45, A:D.47, A:N.99, A:N.99 Water bridges: A:D.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Raux, B. et al., Exploring Selective Inhibition of the First Bromodomain of the Human Bromodomain and Extra-terminal Domain (BET) Proteins. J.Med.Chem. (2016)

Release Date

2016-01-20

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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