SMTL ID : 5qbu.1 (1 other biounit)

Crystal structure of human Cathepsin-S with bound ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

monomer

Ligands

1 x B8J: 1-[1-(3-{5-(1H-imidazole-5-carbonyl)-3-[4-(trifluoromethyl)phenyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-1-yl}propyl)piperidin-4-yl]-3-methyl-1,3-dihydro-2H-benzimidazol-2-one(Non-covalent)

B8J.1: 16 residues within 4Å: Chain A: W.27, K.61, G.63, G.70, F.71, M.72, T.74, Y.119, G.138, Q.161, N.162, V.163, N.164, H.165, G.166, F.212 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.71, A:V.163, A:F.212 Hydrogen bonds: A:Y.119, A:N.162, A:V.163 pi-Stacking: A:F.71, A:F.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bembenek, S.D. et al., Crystal structure of human Cathepsin-S with bound ligand. To be published

Release Date

2017-12-20

Peptides

Cathepsin S: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin S

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